PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13419

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 428aa MW: 48760.9 Da PI: 4.4427

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13419	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l ++++ G g+W++ ++ g+ R++k+c++rw +yl OIW13419 14 KGRWTAEEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	46.9	6.5e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE+ l+ ++++ +G++ W++Ia +++ gRt++++k++w+++l OIW13419 67 RGNISVEEESLISKLHASFGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112 78899***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MGRAPCCEKV GLKKGRWTAE EDEILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRTDLKRGNI SVEEESLISK LHASFGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKIFSYN 120 YTTSTKHDAT TMIEPQIIAF PPKRRGGRTS RWAMKKNKTY ALKTKLNNHQ QSPKQVQIHQ 180 NNDAVPLPPT PSLESENLTM IMDFMALDPE REEEEEEVGD GLGKSSSQQE ENTRGTLVQE 240 DQYFAVEEGE RINEMFCIEG WKEKSDYEIL GQYQEVINGC WELNFNEFMD TCFVEQESGV 300 LSLTFGEEIL ESNNNSDNNS NNNNNEEEVV GNGATRNEPT CTTNQCSNGE CRDLCSSMAL 360 SLDHGNNNNS DLDFESVIQF NGNMVSKSLE DKENLLSWLW EDDDGWGKDC DQFGDIDSQL 420 DVMVAWFS

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MGRAPCCEKV GLKKGRWTAE EDEILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRTDLKRGNI SVEEESLISK LHASFGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKIFSYN  120
YTTSTKHDAT TMIEPQIIAF PPKRRGGRTS RWAMKKNKTY ALKTKLNNHQ QSPKQVQIHQ  180
NNDAVPLPPT PSLESENLTM IMDFMALDPE REEEEEEVGD GLGKSSSQQE ENTRGTLVQE  240
DQYFAVEEGE RINEMFCIEG WKEKSDYEIL GQYQEVINGC WELNFNEFMD TCFVEQESGV  300
LSLTFGEEIL ESNNNSDNNS NNNNNEEEVV GNGATRNEPT CTTNQCSNGE CRDLCSSMAL  360
SLDHGNNNNS DLDFESVIQF NGNMVSKSLE DKENLLSWLW EDDDGWGKDC DQFGDIDSQL  420
DVMVAWFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	5e-78	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW13419