PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12987

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 430aa MW: 49316.8 Da PI: 4.4758

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12987	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.2	2.8e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEd++l + +++ G g+W++ ++ g+ R++k+c++rw +yl OIW12987 14 KGRWTEEEDDILRKFIQKNGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52	1.6e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE++ +v++++ +G++ W++Ia +++ gRt++++k++w+++l OIW12987 67 RGNISAEEEDTIVKLHASFGNR-WSLIATHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MGRTPCCEKV GLKKGRWTEE EDDILRKFIQ KNGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRGNLKRGNI SAEEEDTIVK LHASFGNRWS LIATHLPGRT DNEIKNYWNS HLSRKIYSFR 120 KLATTTDTNP TPKLIIPPKR RSGRTSRWAM KKNKTYTQKA TRIPKQIIPQ QNINEATQQK 180 ENNNINETAV EVPLPPTPLL ERESDFMAFD PDAEDKLEFC DEPSFYEDGK RLDSNYSLNY 240 SSGDMDISFP MEEVKTLMHD ILLDGEKQIS DHMIEGLYYQ QVDEFINDSG GALSYGDQDI 300 MDNCVVEPCG ISSEDSGAIK AMNGGYSETS NEVDDLCRDK MQTIEDLNSG CVNLITRSTG 360 ENGEWFYDNL DWENVMAFTN YGDNNESDAR EYKEDLLTWL WKDDDWESDC NTLGEIDPQA 420 QNDMVAWFLS

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MGRTPCCEKV GLKKGRWTEE EDDILRKFIQ KNGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRGNLKRGNI SAEEEDTIVK LHASFGNRWS LIATHLPGRT DNEIKNYWNS HLSRKIYSFR  120
KLATTTDTNP TPKLIIPPKR RSGRTSRWAM KKNKTYTQKA TRIPKQIIPQ QNINEATQQK  180
ENNNINETAV EVPLPPTPLL ERESDFMAFD PDAEDKLEFC DEPSFYEDGK RLDSNYSLNY  240
SSGDMDISFP MEEVKTLMHD ILLDGEKQIS DHMIEGLYYQ QVDEFINDSG GALSYGDQDI  300
MDNCVVEPCG ISSEDSGAIK AMNGGYSETS NEVDDLCRDK MQTIEDLNSG CVNLITRSTG  360
ENGEWFYDNL DWENVMAFTN YGDNNESDAR EYKEDLLTWL WKDDDWESDC NTLGEIDPQA  420
QNDMVAWFLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	2e-72	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW12987