PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW12623
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 209aa    MW: 22909.8 Da    PI: 6.6418
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW12623genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.41.4e-39161171101
    DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
               +C aCk+lrrkCa+dC++apyf++eq + +fa++hk+FGasnv+kll ++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l ++k++
  OIW12623  16 PCGACKFLRRKCAPDCIFAPYFCSEQgADRFAAIHKVFGASNVSKLLFNIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQ 116
               7*************************89*******************************************************************999987 PP

    DUF260 101 l 101
               l
  OIW12623 117 L 117
               5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MDSVSGNGTG SSTGSPCGAC KFLRRKCAPD CIFAPYFCSE QGADRFAAIH KVFGASNVSK  60
LLFNIPAHDR CEAVVTIAYE AQARIRDPVY GCVSHIFALQ QQVACLQAQL MQAKAQLAHQ  120
NLIENQWSGN VAAKPFNPFC TTSMMNPISP QSSLESSIDH SSTSDGMSMQ DTQSIEDSSF  180
QAWAKKISYN NDFGELQDLA LRMMQRNYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.14e-55LBD family protein