PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW12513
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 285aa    MW: 31938 Da    PI: 7.4998
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW12513genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.22.1e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ lvd+++++G g+W+t +++ g+ R++k+c++rw +yl
         OIW12513 14 KGAWTPEEDKTLVDYINKHGHGSWRTLPKHAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding55.71.1e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE+  +++++++lG++ W++Ia+ ++ gRt++++k++w+++l
         OIW12513  67 RGPFTNEEETTIIQLHAMLGNR-WAAIASQLP-GRTDNEIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGKAPCCEKH GVKKGAWTPE EDKTLVDYIN KHGHGSWRTL PKHAGLLRCG KSCRLRWINY  60
LRPDIKRGPF TNEEETTIIQ LHAMLGNRWA AIASQLPGRT DNEIKNYWNT HLKKRLFGSD  120
DCLISAKKVH VSPDLKIVKS ESPCTGHMAQ WESARVEAEA RLSMESSFLN SSSTTNQTYN  180
DCYLQLWHSE VGHSFRTIKG KEEEGVVSSS SLKMKQVEKA STFAKMTQQQ ASCYKPKLED  240
DDDDGTSGGT ESGNCEFFYA CDSAIKHLLD VPGADIGFWD TLTVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.13e-85MYB family protein