PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12429

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 348aa MW: 38916.8 Da PI: 7.7616

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12429	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v +G+g+W++++++ g++R++k+c++rw +yl OIW12429 14 RGLWTPEEDAKILAYVSSHGTGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	46.2	1.1e-14	70	110	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T++E+ l++++++ G++ W++Iar+++ gRt++++k++w++ OIW12429 70 FTPQEEMLIINLHAAIGSR-WSLIARRLP-GRTDNDVKNYWNT 110 9****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MGRPPCCDKS NVKRGLWTPE EDAKILAYVS SHGTGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLKHDGF TPQEEMLIIN LHAAIGSRWS LIARRLPGRT DNDVKNYWNT KLRKKLMKMG 120 IDPITHKPVS QVLSDLGSIS TFPNTNNQMS FVNNASMKNM LPTRTEPYAS QYSSITTNTS 180 AKNHTKVDQV HSLDHQYHVF SEASSSNSSS TSSNIERLCS TQSYSNHNPQ AQITTPCSSF 240 EWSAFLHSDP FIWSEFQQLQ QCDMQMVMSL PKPSGLMQSG IVISNNNDQV GASEGSVAVT 300 CDPSMSYQMK KQCEVHSSLG DSFVDGILDK DSEIREAFPN ILDAAFDY

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MGRPPCCDKS NVKRGLWTPE EDAKILAYVS SHGTGNWTLV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHDGF TPQEEMLIIN LHAAIGSRWS LIARRLPGRT DNDVKNYWNT KLRKKLMKMG  120
IDPITHKPVS QVLSDLGSIS TFPNTNNQMS FVNNASMKNM LPTRTEPYAS QYSSITTNTS  180
AKNHTKVDQV HSLDHQYHVF SEASSSNSSS TSSNIERLCS TQSYSNHNPQ AQITTPCSSF  240
EWSAFLHSDP FIWSEFQQLQ QCDMQMVMSL PKPSGLMQSG IVISNNNDQV GASEGSVAVT  300
CDPSMSYQMK KQCEVHSSLG DSFVDGILDK DSEIREAFPN ILDAAFDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	1e-86	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW12429