PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11209

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 440aa MW: 49238 Da PI: 6.8387

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11209	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.7	5.3e-17	108	157	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OIW11209 108 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 157 78*****************......55**********************997 PP
2	AP2	39.1	1.8e-12	200	250	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ +Aa+a++ a+ k +g OIW11209 200 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSELDAARAYDMAAIKCNG 250 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MLDLNLNNTL HFESSLSFNS SSSILNPTDT DDSSSFDNTT AFPYNFPILN SVNHSHIPTI 60 QLFPPAGDVQ QLPEPPCSVI ASQRIITSQT QQKQVVKKSR RGPRSRSSQY RGVTFYRRTG 120 RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAIKFRGVDA DINFNVSDYD EDIKQMGNFT 180 KEEFVHILRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQF LGKKYIYLGL FDSELDAARA 240 YDMAAIKCNG REAVTNFEAS SYEGEVISQA DNEDSELILD LNLGIAPPSY DGQIKNMHNN 300 ESGLQVQRSW DDIPIDSRLM FEHSGPRPMM AQPSHGFSLA SEHPPLRNGT NFLPICKERA 360 IENRMETDPL ANRAWQLQGP YGGAPLIPPF SAAASSGFPS TIIPSAAESQ LHFPNMMFFN 420 PHFPPSIPNS STIPNFYCRS

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MLDLNLNNTL HFESSLSFNS SSSILNPTDT DDSSSFDNTT AFPYNFPILN SVNHSHIPTI  60
QLFPPAGDVQ QLPEPPCSVI ASQRIITSQT QQKQVVKKSR RGPRSRSSQY RGVTFYRRTG  120
RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAIKFRGVDA DINFNVSDYD EDIKQMGNFT  180
KEEFVHILRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQF LGKKYIYLGL FDSELDAARA  240
YDMAAIKCNG REAVTNFEAS SYEGEVISQA DNEDSELILD LNLGIAPPSY DGQIKNMHNN  300
ESGLQVQRSW DDIPIDSRLM FEHSGPRPMM AQPSHGFSLA SEHPPLRNGT NFLPICKERA  360
IENRMETDPL ANRAWQLQGP YGGAPLIPPF SAAASSGFPS TIIPSAAESQ LHFPNMMFFN  420
PHFPPSIPNS STIPNFYCRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	5e-95	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW11209