PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW11006 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | GATA | ||||||||
Protein Properties | Length: 248aa MW: 27932.6 Da PI: 7.724 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 64.1 | 1.6e-20 | 129 | 163 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++ OIW11006 129 CANCDTTSTPLWRNGPQGPKSLCNACGIRFKKEER 163 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MHHSCSDDHQ SHVMGHCTCG MFHSQTTPYS TLFSMPNHKP YEYDHHEPEM YSYTTTPSSS 60 SVDCTLSLGT PSTRSVEDEE KRSRHERRSI SNFCWNLLQP KYSTKSQTKA SSRGSNSNNT 120 NDSILPRRCA NCDTTSTPLW RNGPQGPKSL CNACGIRFKK EERRANAAAA TPTAASCGVV 180 DSAQRYSHHN NSWYSQSQSQ KMQCLSPAMG NEFRFMDDAN RDSENGIPFL SWRFNVTDTT 240 SFVHDFTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50870.1 | 2e-52 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW11006 |