 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OIW10896 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
| Family | MYB | ||||||||
| Protein Properties | Length: 336aa MW: 37771.4 Da PI: 6.8732 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 45.6 | 1.6e-14 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++ Ed +l+ +++q+G g +W + ++++g++R++k+c++rw++yl
OIW10896 14 KGPWSPLEDAKLKAYIEQHGYGgNWIALPQKIGLKRCGKSCRLRWLNYL 62
79******************999************************97 PP
| |||||||
| 2 | Myb_DNA-binding | 34.6 | 4.5e-11 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +++eE++ + + G++ W+ Ia ++ gRt++++k++w++
OIW10896 69 GGFSEEEEDVICSLYVSIGSR-WSIIATQLP-GRTDNDIKNYWNT 111
569******************.*********.***********97 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 336 aa Download sequence |
MGRAPCCDKA NVKKGPWSPL EDAKLKAYIE QHGYGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIVHGG FSEEEEDVIC SLYVSIGSRW SIIATQLPGR TDNDIKNYWN TKLKKKLIGK 120 QRKDQQTQAC IVSSLRQDMK REPYSAVASG SLPQTSYWPS EHNSSVHVQA ANDNNVSIQY 180 NDLNNQTSFK NLLLNNKAVT ATFNSQVACD ISFQQEQQVF PLTMNIVNPI NSGSRTSLTS 240 NIFQGFENFP NDLRELVCVD PQQIDGSMQG FYGMEMMDIA NNNGSNNTTP TESTSWGDIS 300 SFVYSPNLVS DYEGCPQGIP QDITFEESRY FGIQMR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G49690.1 | 6e-80 | MYB family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OIW10896 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|