PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW09800 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | YABBY | ||||||||
Protein Properties | Length: 216aa MW: 24162.6 Da PI: 7.5776 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 231.4 | 2.2e-71 | 11 | 178 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102 d+ s seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++ + + hl+ s+ + ++ l+ + +++++++++ s+ + OIW09800 11 DHLSHSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHLGYSFISPSHNLLEEIPNPSPNLFINQNANMAHDFSMP-P 110 67899**********************************************99999999********99998888888888888888888887777644.8 PP YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + +e+pr+p ++rPPekrqrvPsaynrfik+eiqrika nPdi+hreafsaaaknWahfP+ihfgl OIW09800 111 RTAIDELPRPPITNRPPEKRQRVPSAYNRFIKDEIQRIKAVNPDITHREAFSAAAKNWAHFPHIHFGL 178 99999****999******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MSSSSSTLSL DHLSHSEQLC YVHCNICDTV LAVSVPCTSL FKTVTVRCGH CTNLLPVNMR 60 GLLLPSPNQF HLGYSFISPS HNLLEEIPNP SPNLFINQNA NMAHDFSMPP RTAIDELPRP 120 PITNRPPEKR QRVPSAYNRF IKDEIQRIKA VNPDITHREA FSAAAKNWAH FPHIHFGLMP 180 TEQTVMKKTN VCQQEGEEVL IKDGFYGSAN VGVSPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 1e-77 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW09800 |