PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08859

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 279aa MW: 31122 Da PI: 8.4814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08859	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl OIW08859 14 KGAWTKEEDDRLISYIRAHGEGSWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	57.4	3.3e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEde +++++ +lG++ W++Ia +++ gRt++++k++w+++ OIW08859 67 RGNFTEEEDEVIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDDRLISYIR AHGEGSWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDEVIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIRRKLMSRG 120 IDPATHRPLN DADNPAQDQE IQPSVAVTNT ISFASSASAA AVVVKQEQDT SITSKSSMFC 180 GVVKINNNNN NNEDGKGTML EHCPDLNLEL TISPPRLNES DEPLKNMERS LCFGLKNSSV 240 DGNIGNTSSG IRNNSTGASY DFLGLKTTGV WDYRRLEMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-98	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW08859