PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08635

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 675aa MW: 74992.5 Da PI: 8.2913

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08635	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	583	632	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ eE e lv+av++lG+g+W+ + + k+Rt ++k++w ++ OIW08635 583 RRPFSVEEVEALVHAVEKLGTGRWRDVKVCAFdnaKHRTYVDLKDKWKTL 632 679*************************999************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MVFQKSLEYR FNGYQVPATA RRARSTRRRA KFQRRVEDNQ ICAFELLATI AGKLLQEKEN 60 PTMTIDTSSE KDQSGSVKEC QNANKLFKAE LSDEGSCDNK CFSLLSSQTN NPNCCLSEFP 120 NPEIDVYSGI ASIVTSSNSL ERVVADKLVD GKSQDGMENV TSNAKLDSTG YAEVSCCKLD 180 GDTSEVKDEL HKFQNVPIES GTEMCCFEDP LDENPTALIN LDDNVKLSGY NDGIPCSSFS 240 KGCGNVPVVS RDDDEKFSGC SNPCTKTKSF RPITSVGDRV RKTLASKYSK VAQESKVHSN 300 NDGDFKPTFH IKKYCYKRQR SQMNIPLKKR KLFNCSSVSN SNKFIRSGGI YHSPENDMSH 360 YTSGSSPGRM RKDHGIDSLE RCQHSALQCG GSHVKLRIRS FRVPELFIEI PETATIGSLK 420 RTVLDAVTAI LGGGLRVGVS LQGKKVRDDS KTLIQTGISL DSHLGSLGFT LEPNSSPSLL 480 HLCAAHSSHV PSAEIPQSPI RPAIHQRVQG SLDMLPDHQV TNFGNFVVND HDSTPSPINT 540 SVDKSRTDSK ALDTVPEMGE DELAMVPVLQ KSKRSEIVQR RIRRPFSVEE VEALVHAVEK 600 LGTGRWRDVK VCAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEQVPQ QLLNRVLIAH 660 AYWSQQQNQE TNTTL

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MVFQKSLEYR FNGYQVPATA RRARSTRRRA KFQRRVEDNQ ICAFELLATI AGKLLQEKEN  60
PTMTIDTSSE KDQSGSVKEC QNANKLFKAE LSDEGSCDNK CFSLLSSQTN NPNCCLSEFP  120
NPEIDVYSGI ASIVTSSNSL ERVVADKLVD GKSQDGMENV TSNAKLDSTG YAEVSCCKLD  180
GDTSEVKDEL HKFQNVPIES GTEMCCFEDP LDENPTALIN LDDNVKLSGY NDGIPCSSFS  240
KGCGNVPVVS RDDDEKFSGC SNPCTKTKSF RPITSVGDRV RKTLASKYSK VAQESKVHSN  300
NDGDFKPTFH IKKYCYKRQR SQMNIPLKKR KLFNCSSVSN SNKFIRSGGI YHSPENDMSH  360
YTSGSSPGRM RKDHGIDSLE RCQHSALQCG GSHVKLRIRS FRVPELFIEI PETATIGSLK  420
RTVLDAVTAI LGGGLRVGVS LQGKKVRDDS KTLIQTGISL DSHLGSLGFT LEPNSSPSLL  480
HLCAAHSSHV PSAEIPQSPI RPAIHQRVQG SLDMLPDHQV TNFGNFVVND HDSTPSPINT  540
SVDKSRTDSK ALDTVPEMGE DELAMVPVLQ KSKRSEIVQR RIRRPFSVEE VEALVHAVEK  600
LGTGRWRDVK VCAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEQVPQ QLLNRVLIAH  660
AYWSQQQNQE TNTTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-118	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIW08635