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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW08403 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 326aa MW: 37035.1 Da PI: 4.7561 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 51.1 | 3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WTteEd++l+ +v+++G +W+ ++ g+ R++k+c++rw++yl
OIW08403 14 KGTWTTEEDKKLIAYVTRYGCWNWRQLPKFAGLQRCGKSCRLRWLNYL 61
799*****************99************************97 PP
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| 2 | Myb_DNA-binding | 53.8 | 4.3e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T+eE+e++++++++lG++ W+ Ia ++ gRt++++k++w++
OIW08403 67 RGNFTKEEEEIIIRLHNKLGNR-WSIIATHLL-GRTDNEIKNYWHT 110
89********************.********9.***********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 326 aa Download sequence |
MVRTPSCDKS GMRKGTWTTE EDKKLIAYVT RYGCWNWRQL PKFAGLQRCG KSCRLRWLNY 60 LRPNIKRGNF TKEEEEIIIR LHNKLGNRWS IIATHLLGRT DNEIKNYWHT SLKKISQQTK 120 VTNENSKASS KPKDNESNLG SYSLPNNVSL QVTPPTTTSQ ISDSITSSLS PLSSSSEFSS 180 ISWGDTNCTT KLVIEDDFPF LDDAFWTKSD IVDISYTPPS EIVQGDSNDA FESLYTTQNL 240 AALSPQYQSS SESMVLESGS FLDADTEVKM DNFWTQPFVS DTCQVPNQLL TPFETQSQYF 300 SSVHGADFWN QDDNDCYLYD GVMDLV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G23250.1 | 5e-55 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW08403 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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