PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW08354 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ERF | ||||||||
Protein Properties | Length: 214aa MW: 23814.7 Da PI: 9.671 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.4 | 5.4e-21 | 22 | 72 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a+++a+++++g OIW08354 22 PHFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDKAARQFRG 72 689*******.**********8...557************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MAVKERKCEK NNEKPNNNVI EPHFRGVRKR PWGRYAAEIR DPGKKSRVWL GTFDTAEEAA 60 RAYDKAARQF RGPKAKTNFP SELNNNENRQ NNNNRSPSQS STVESSTPER EITPRRDINM 120 DRFPFLPLQP SAPQIMAFGC GAAAVEGMLT AAPGNPVFFM GQRFPVRFEP VPVLFSNGFG 180 GGAQSDSDSS SVVDCQQPKR TLNLDLNLAP PMDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 1e-28 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW08354 |