PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW06541
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 212aa    MW: 24486.9 Da    PI: 10.0447
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW06541genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.62.6e-26959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              k+ienk+ rqvtfskRr g+ KKA+E+SvLCda+va i+f ++gkl+e+ss
  OIW06541  9 KQIENKTSRQVTFSKRRSGLRKKAHEISVLCDAQVAFIVFNNKGKLFEFSS 59
              78***********************************************96 PP
2K-box88.99.3e-308317310100
     K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
               + + + +++ +  kL++++e L+r++R+++G dL++L+l+eLq+LeqqL+ +lk+iR+kKn+++ e+i+elqkk + l+++n++  +k++e
  OIW06541  83 NIESQGNWSLDCFKLNNKVEVLERNLRNYVGHDLDPLNLRELQSLEQQLDMALKRIRTKKNQVINESISELQKKARLLHDQNNNVANKIKE 173
               4456789*********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MGRGRVQLKQ IENKTSRQVT FSKRRSGLRK KAHEISVLCD AQVAFIVFNN KGKLFEFSSE  60
SSMKIILERY ERHGHEAQID GANIESQGNW SLDCFKLNNK VEVLERNLRN YVGHDLDPLN  120
LRELQSLEQQ LDMALKRIRT KKNQVINESI SELQKKARLL HDQNNNVANK IKEQEKIVGE  180
NQQCWPQTLY PNSSTFNLCS PQRLVPSLTL GL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.15e-75MIKC_MADS family protein