PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW06405 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 27723.4 Da PI: 6.5459 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.4 | 1.1e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRrng++KKA ELSvLCdaevaviifsstgklye+s+ OIW06405 9 KKIENLNSRQVTFSKRRNGLMKKARELSVLCDAEVAVIIFSSTGKLYEFSN 59 68***********************************************95 PP | |||||||
2 | K-box | 60 | 9.9e-21 | 91 | 171 | 18 | 98 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ Lk+ei +L++ +++G++L+ LslkeLq+Le+qL++++ +++kK+++lleq+++++ +e+++ en++Lrk+l OIW06405 91 ESDSNLLKDEITKLRSAYLRMIGKELDGLSLKELQHLENQLNEGILAVKDKKEQVLLEQLRRSRLQEEKAMLENESLRKQL 171 567889*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGKIEIKK IENLNSRQVT FSKRRNGLMK KARELSVLCD AEVAVIIFSS TGKLYEFSNS 60 SMEHTLSRYS RGLDLECGEQ SSDEPPTMVI ESDSNLLKDE ITKLRSAYLR MIGKELDGLS 120 LKELQHLENQ LNEGILAVKD KKEQVLLEQL RRSRLQEEKA MLENESLRKQ LLEMENSTRS 180 QFLQLNSLDR PNTINCSKFL SNCASEDNEL SDASLQLGLS TDYGRNRKTL KIEPCNGSGS 240 QVASQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 1e-55 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW06405 |