PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06335

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 300aa MW: 33575.4 Da PI: 5.957

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06335	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde lv+++k+ G g+W+t + + g+ R++k+c++rw +yl OIW06335 14 RGAWTPEEDEALVEYIKMNGHGSWRTLPMHAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	54.7	2.3e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++TteE+ +++++ +lG++ W+tIa+ ++ gRt++++k++w++ OIW06335 67 RGPFTTEEESTIIQLHGMLGNR-WATIASQLP-GRTDNEIKNYWNT 110 89******************.*****.*********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGKALCCDKQ GVRRGAWTPE EDEALVEYIK MNGHGSWRTL PMHAGLLRCG KSCRLRWINY 60 LRPDIKRGPF TTEEESTIIQ LHGMLGNRWA TIASQLPGRT DNEIKNYWNT QLKKRLPNSG 120 HFVGSQQPSF STDHSTIVKT ESPSMRHMVQ WENARVEAEA RLSMESSLLN SWSTSESHPD 180 HFLQLWHSEV GQSFRAIKGK EGGGGVCQSL VSQASSSKLE SCSDVSLQDK NTGSSTFANM 240 KQEQDSSYKP KLEDGTAESE LGYYEFLDSS DSALNHMLDM HDGEIGFLCE SDSFLNTLDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	6e-87	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW06335