PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06209

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 304aa MW: 35285.9 Da PI: 6.5144

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06209	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.7	6.5e-14	15	60	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W+ eEde l++ v+++G+++W++I + ++Rt+k+c++rw + OIW06209 15 KGPWSVEEDEVLLKHVNKYGPRDWSSIRTKDLLHRTGKSCRLRWVN 60 79***********************887779*********87 PP
2	Myb_DNA-binding	40.3	7.5e-13	71	111	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++eE+ +++ +++G++ W++Ia ++ gRt++++k++w OIW06209 71 KFSAEEERVVIELQAEFGNK-WAKIATYLE-GRTDNDVKNFWS 111 79****************.*****.*********6 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MERKQSEFDR THVKKGPWSV EEDEVLLKHV NKYGPRDWSS IRTKDLLHRT GKSCRLRWVN 60 KLRPDLKSGC KFSAEEERVV IELQAEFGNK WAKIATYLEG RTDNDVKNFW SSRRKRLERI 120 LKKPSPSKPQ KNKGKIPLNL IQVEEVPACS SNQLEENYNS YPASYILNTE EIKMVHLPDL 180 TKPNYQNQYL ENDLNAMDVK ATSFHMVPEP SFAYSSGYNC HQLPEPQMDF TLFPGCHDLA 240 PEPFDPNFID IFEQKNCSES VSSQKFVTKL PTLGLEGSCQ NTIPNGFFEE FPTEMLEYFE 300 HVPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	5e-64	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW06209