PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW05916 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 243aa MW: 28176.5 Da PI: 6.3712 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.5e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEde+l d+v+++G +W++ ++ g+ R++k+c++rw++yl OIW05916 14 KGAWSREEDERLRDYVQRYGHSNWRKLPKLAGLARCGKSCRLRWLNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.2e-16 | 68 | 112 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g T+ E+e + + +++lG++ W++Ia++++ gRt++++k++w+++l OIW05916 68 GDYTQKEEEMIMKFHQELGNK-WSLIAEKLP-GRTDNEIKNHWHSHL 112 5689*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MVRAPFYDKS GVKKGAWSRE EDERLRDYVQ RYGHSNWRKL PKLAGLARCG KSCRLRWLNY 60 LKPNLKHGDY TQKEEEMIMK FHQELGNKWS LIAEKLPGRT DNEIKNHWHS HLKKCLKSND 120 ITTSDLNSKP GHDPLDGKTT HQFEKSESLD ANEGADLYHI LESSSPMSPQ PCYINEAHNY 180 SLTSNVAEST MNCNTSKEDI VDQWVTFEEF GSGFWTEPFI VEHTYTDNEI LCDEGLAFFV 240 PHF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 6e-56 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW05916 |