PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05811

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 842aa MW: 95553.5 Da PI: 8.383

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05811	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	58.2	1.1e-18	765	798	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++C +t+Tp+WR+gp g+ktLCnaCG++yr+ + OIW05811 765 CTHCEVTETPQWREGPMGPKTLCNACGVRYRSGR 798 *******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 842 aa Download sequence
MDHSTLKFCV LLILVGFLVN VSFAKNDFEN CKRIVKVWAD SSLDQEIGED KHKLRDLLFF 60 LHVPRTGGRT YFHCFLKKLY PSYLECPRSY DKLRFDPRVR ISAMVRLLLS DQEIMSLNPG 120 NSFSTRGNKT AYMYHLRTRE KNCRLLVTHD DYSMIPKLPR QKTSVVTILR DPIDRVFSTY 180 EFSIEVAARF LVHPNLTSAT QMTKRLRSKS KGVSTLDIWP WKYLVPWMRE DLFARTLNGQ 240 RDARYSRGLN TTESNDSYDM EDFAMPLKEY INHPAAGDVV HNGATFQVAG LTNNSYIAEA 300 HEVRHCVQKY KILGKFVLQV AKKRLDDMLY VGLTEEHRES ATMFANVVGA QVISQLNAPN 360 SSLDIGDKIE QRSFSDSDPH SSEHQNSTSD RGASKVTSSD SGEATELNMT VGELMNSYEG 420 CTSNLRKSYS GRRIASLKRI SPVNFSREAR LEVSEEVLQE IRSLNDLDIE LYEYARAIFY 480 RQHKTTLQTF TEVIVCPRFS NNCCNCFGIG YIADMKDCWF LDNNFNGLSD GIFDDVVEFF 540 DFPIEDAETD VVEEDWAAQF KHLEEPSVGV FSISSFGLCD TTQNVTPKLG AGSTSSASIR 600 ALEVLSNIFV AFWLREKIVE RRCSSLGGKL DGDSNARLEK TAGPTYDKTT PNQNVPFNSK 660 DVHKFRTYSP VSVFESSSSS SVENSNFDLP VIPLKRPRGK RLRLSSFNQL LSLPFISPSP 720 DFETQASGKL KTRVKRQRKK DLLLLPDHCE MKRLLSQESD VFGKCTHCEV TETPQWREGP 780 MGPKTLCNAC GVRYRSGRLF PEYRPAASPT FVASLHSNSH KKVIEMRSGA IKKTIRGSVF 840 SL

Sequence ? help Back to Top

Protein Sequence Length: 842 aa Download sequence

MDHSTLKFCV LLILVGFLVN VSFAKNDFEN CKRIVKVWAD SSLDQEIGED KHKLRDLLFF  60
LHVPRTGGRT YFHCFLKKLY PSYLECPRSY DKLRFDPRVR ISAMVRLLLS DQEIMSLNPG  120
NSFSTRGNKT AYMYHLRTRE KNCRLLVTHD DYSMIPKLPR QKTSVVTILR DPIDRVFSTY  180
EFSIEVAARF LVHPNLTSAT QMTKRLRSKS KGVSTLDIWP WKYLVPWMRE DLFARTLNGQ  240
RDARYSRGLN TTESNDSYDM EDFAMPLKEY INHPAAGDVV HNGATFQVAG LTNNSYIAEA  300
HEVRHCVQKY KILGKFVLQV AKKRLDDMLY VGLTEEHRES ATMFANVVGA QVISQLNAPN  360
SSLDIGDKIE QRSFSDSDPH SSEHQNSTSD RGASKVTSSD SGEATELNMT VGELMNSYEG  420
CTSNLRKSYS GRRIASLKRI SPVNFSREAR LEVSEEVLQE IRSLNDLDIE LYEYARAIFY  480
RQHKTTLQTF TEVIVCPRFS NNCCNCFGIG YIADMKDCWF LDNNFNGLSD GIFDDVVEFF  540
DFPIEDAETD VVEEDWAAQF KHLEEPSVGV FSISSFGLCD TTQNVTPKLG AGSTSSASIR  600
ALEVLSNIFV AFWLREKIVE RRCSSLGGKL DGDSNARLEK TAGPTYDKTT PNQNVPFNSK  660
DVHKFRTYSP VSVFESSSSS SVENSNFDLP VIPLKRPRGK RLRLSSFNQL LSLPFISPSP  720
DFETQASGKL KTRVKRQRKK DLLLLPDHCE MKRLLSQESD VFGKCTHCEV TETPQWREGP  780
MGPKTLCNAC GVRYRSGRLF PEYRPAASPT FVASLHSNSH KKVIEMRSGA IKKTIRGSVF  840
SL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	729	740	KLKTRVKRQRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54810.2	1e-34	GATA family protein

Link Out ? help Back to Top
Ensembl	OIW05811