PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05781

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 414aa MW: 46097.4 Da PI: 8.7752

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05781	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.9	9.4e-17	136	185	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OIW05781 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAVKFRG 185 78*****************......55********************99987 PP
2	AP2	41.5	3.4e-13	228	278	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g OIW05781 228 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 278 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MFDLNLNSDL ADSTKNCNSV QLMEKFPEDY CNKMAESATS NSSVVNADGS SNDDSYSTRA 60 EEAFTVDFGI RKAEGRNDVV TMELFPVNEV EGVLFGNWNQ TSSFDRQSVT KVVQVEEQPQ 120 PPQVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA 180 VKFRGIRADI NFSLSDYEDD LKQMKNLSKE EFIHILRRQS TGFSRGSSKY RGVTLHKCGR 240 WEARMGQFLG KKYIYLGLFD SEVEAARAYD KAAIKCNGRE AVTNFEPSIY EGEMKSAANN 300 ESSSHNLDLN LGMATPGHGV KEKRERVGKF SIDPSKGHPS WAWQMHGQVT ATVVPPFSAA 360 ASSGFSISAL PPSSSIFPKK HAYSIPQSLC FSLSSTHSSN ASQYCQVKPP QAPQ

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MFDLNLNSDL ADSTKNCNSV QLMEKFPEDY CNKMAESATS NSSVVNADGS SNDDSYSTRA  60
EEAFTVDFGI RKAEGRNDVV TMELFPVNEV EGVLFGNWNQ TSSFDRQSVT KVVQVEEQPQ  120
PPQVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA  180
VKFRGIRADI NFSLSDYEDD LKQMKNLSKE EFIHILRRQS TGFSRGSSKY RGVTLHKCGR  240
WEARMGQFLG KKYIYLGLFD SEVEAARAYD KAAIKCNGRE AVTNFEPSIY EGEMKSAANN  300
ESSSHNLDLN LGMATPGHGV KEKRERVGKF SIDPSKGHPS WAWQMHGQVT ATVVPPFSAA  360
ASSGFSISAL PPSSSIFPKK HAYSIPQSLC FSLSSTHSSN ASQYCQVKPP QAPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-107	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW05781