PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW05633 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 225aa MW: 25755.2 Da PI: 9.2027 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.4 | 4.6e-15 | 51 | 97 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E+ l+v++ + +G+g+Wk I+r + + +t+ q+ s+ qky OIW05633 51 RVPWTEDEHRLFVHGLTIYGKGDWKGISRNLVLSKTPAQIASHAQKY 97 789*******************************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 225 aa Download sequence |
MFHSYYVSAT DSQSPTEPSD YTQRTFSLPP LPSPPPLPLP PPPPQVPRKK RVPWTEDEHR 60 LFVHGLTIYG KGDWKGISRN LVLSKTPAQI ASHAQKYFIR QNASPSLNPS RKRRRSIHDI 120 TLTMQEPYRV MLPQLVHNDV VAPPQELHQG QPVLQPNPPT ADIDSKLMGY MNSLPPLCNC 180 HFINHDNELL QQPQPQPQPQ SHYVSHMYMD PQGQTIYVNR YGYQS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 111 | 115 | RKRRR |
2 | 111 | 116 | RKRRRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G58900.1 | 2e-28 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW05633 |