PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04188

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SRS

Protein Properties

Length: 555aa MW: 59168.8 Da PI: 7.041

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04188	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	216.3	7.1e-67	338	496	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103 gt++CqdCGnqakkdC+ +RCRtCCksrgfdC thvkstWvpaa+rrerq ++a + + ++a+++ +k+++ +++++++s+t++s+++++++++ts OIW04188 338 GGTMTCQDCGNQAKKDCSNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMQAVTGA-GGSTASTSGAKKPKL--ISSHTTTSHTSTSNTTPPRSFDTS 435 5899********************************************887777544.344455566666665..6999999************9 PP DUF702 104 s..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 s lP +++++avf+cv+v++v+dg++e+aYq++v+igGhvfkG+LydqG+e+ OIW04188 436 SshqdagikepLPGQIRAPAVFKCVKVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGVEN 496 99******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MFEFPEKMLC HADSFFIGHP IPALSIDDEL VPGQTYFVIP IDIFACHTLS ASSLAALGSC 60 VSNKSPIKFG ACPFEYLKGS DGRVLIKVMP EFITRLINGE NNNNNGSSSN SFLCSTPELQ 120 KQYEQLVKSK DQTWSPKLET ISEYKLRRLA SDSGGGAFVD WAATSTSAAN RSVTAPPDDL 180 SLGFNATGPT TGGIFSGAST RSINYNLAPQ EMGMVGLRDL FVVTPASTFH HQHEQPHFSD 240 HPHHLSINNS SNPATALGVG IIPLLAATPC LDNETMMSNR NRSNSATQGI QFWQDQQHHH 300 YFKNHNVNAG QENYLQSGGT GDGGGVEVTI TGSGNNSGGT MTCQDCGNQA KKDCSNRRCR 360 TCCKSRGFDC PTHVKSTWVP AARRRERQLM QAVTGAGGST ASTSGAKKPK LISSHTTTSH 420 TSTSNTTPPR SFDTSSSHQD AGIKEPLPGQ IRAPAVFKCV KVTAVEDGDD EYAYQAVVKI 480 GGHVFKGFLY DQGVENRDIY PNLSELHLGG GNGGNGSGAI GSGRNVVSSS SPMMDPSDVY 540 GGGLLGSSTY GNPIN

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MFEFPEKMLC HADSFFIGHP IPALSIDDEL VPGQTYFVIP IDIFACHTLS ASSLAALGSC  60
VSNKSPIKFG ACPFEYLKGS DGRVLIKVMP EFITRLINGE NNNNNGSSSN SFLCSTPELQ  120
KQYEQLVKSK DQTWSPKLET ISEYKLRRLA SDSGGGAFVD WAATSTSAAN RSVTAPPDDL  180
SLGFNATGPT TGGIFSGAST RSINYNLAPQ EMGMVGLRDL FVVTPASTFH HQHEQPHFSD  240
HPHHLSINNS SNPATALGVG IIPLLAATPC LDNETMMSNR NRSNSATQGI QFWQDQQHHH  300
YFKNHNVNAG QENYLQSGGT GDGGGVEVTI TGSGNNSGGT MTCQDCGNQA KKDCSNRRCR  360
TCCKSRGFDC PTHVKSTWVP AARRRERQLM QAVTGAGGST ASTSGAKKPK LISSHTTTSH  420
TSTSNTTPPR SFDTSSSHQD AGIKEPLPGQ IRAPAVFKCV KVTAVEDGDD EYAYQAVVKI  480
GGHVFKGFLY DQGVENRDIY PNLSELHLGG GNGGNGSGAI GSGRNVVSSS SPMMDPSDVY  540
GGGLLGSSTY GNPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.4	2e-82	SRS family protein

Link Out ? help Back to Top
Ensembl	OIW04188