PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW04044 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 140aa MW: 15718.5 Da PI: 10.3927 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 136.4 | 3.4e-42 | 16 | 118 | 71 | 170 |
YABBY 71 lleelkveeenlksnvekeesastsvssekl....senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkih 167 ++++l ++e + k++ ++++s+s+s + +k+ +++++ r+pp irPPek+qrvPsaynrfik+eiqrikasnPdishreafsaaaknWahfP+ih OIW04044 16 QKQNLSFQEPSSKEMGSSSSSSSSSSKCNKFaafeAVEHHNQQHRIPP-IRPPEKKQRVPSAYNRFIKDEIQRIKASNPDISHREAFSAAAKNWAHFPHIH 115 556666666666666666555555555555555554555555566666.9*************************************************** PP YABBY 168 fgl 170 fgl OIW04044 116 FGL 118 *97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 140 aa Download sequence |
MGASLQTFPP QDPQAQKQNL SFQEPSSKEM GSSSSSSSSS SKCNKFAAFE AVEHHNQQHR 60 IPPIRPPEKK QRVPSAYNRF IKDEIQRIKA SNPDISHREA FSAAAKNWAH FPHIHFGLKL 120 DANKQTNLQA EGTQKSKGFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08465.1 | 6e-43 | YABBY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW04044 |