PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03945

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 485aa MW: 53644.9 Da PI: 8.6331

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03945	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.3	1.6e-17	149	198	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g OIW03945 149 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTADAAARAYDRAAIKFRG 198 78*****************......55**********************997 PP
2	AP2	40.4	7.6e-13	241	291	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g OIW03945 241 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDKAAIKCNG 291 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MLNFNLNADS TENDDSVEVL ERFPEASSGT SNSSIVNADG SSNGGGDVDS CSTRAGGGSG 60 VFTFDFGIMT VKGMNNVVTP TKELFPMSSG NWKMQQPSTS SLLPARKTGV NLSLDDGENS 120 GTMKMVQAQK QTPQQPVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD 180 TADAAARAYD RAAIKFRGVD ADINFNLIDY DDDLKQMKNL SKEEFVHILR RQSTGFSRGI 240 SKYRGVTLHK CGRWEARMGQ FLGKKYIYLG LFDNEVEAAR AYDKAAIKCN GREAVTNFEL 300 STYESDMKPE AINEGVSHNL DLNLGIATPG HGPKENKGHL QFQPFPYNMH PGRSSRMETN 360 VNSVIGDPSL KRLVVTEERP FVWNATYSSF FPNEERAERI VPHPSQGLPN WSWQTQGQVT 420 TSPMTQFSTA ASSGFSLSTT FPPTAIFPTK SMNPIPQSLC FTSSNAPVSN APQYYYHVKS 480 PEAPP

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MLNFNLNADS TENDDSVEVL ERFPEASSGT SNSSIVNADG SSNGGGDVDS CSTRAGGGSG  60
VFTFDFGIMT VKGMNNVVTP TKELFPMSSG NWKMQQPSTS SLLPARKTGV NLSLDDGENS  120
GTMKMVQAQK QTPQQPVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD  180
TADAAARAYD RAAIKFRGVD ADINFNLIDY DDDLKQMKNL SKEEFVHILR RQSTGFSRGI  240
SKYRGVTLHK CGRWEARMGQ FLGKKYIYLG LFDNEVEAAR AYDKAAIKCN GREAVTNFEL  300
STYESDMKPE AINEGVSHNL DLNLGIATPG HGPKENKGHL QFQPFPYNMH PGRSSRMETN  360
VNSVIGDPSL KRLVVTEERP FVWNATYSSF FPNEERAERI VPHPSQGLPN WSWQTQGQVT  420
TSPMTQFSTA ASSGFSLSTT FPPTAIFPTK SMNPIPQSLC FTSSNAPVSN APQYYYHVKS  480
PEAPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-113	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW03945