PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03415

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 348aa MW: 39644.2 Da PI: 8.2504

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03415	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.8e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl OIW03415 14 KGPWSPEEDAKLKSYIQKHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.6	2.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ OIW03415 69 GGFSEEEDNIICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIQ KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNLKHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 HSKEQQQAHS NRGNNGVVKQ ESNRVSGSES FSFVQENSTH EYNWQQMPML PLQPLTYTNQ 180 SPCFNDQHSI KKLLINLGGR FSDDNYYPPL DGLLNHQFSN GIYQEQVHVV SSSSACISNN 240 NINKSEVQCA HNNYQGRGST FTSPNEEMVS TTNYPQRLDG LEFFYEEDMV NYKIIGSSRT 300 CSQSSNWAET NTRIYHHPLI ASNYQIQGLS QETQQECVLQ EFSYPVVQ

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKSYIQ KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNLKHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
HSKEQQQAHS NRGNNGVVKQ ESNRVSGSES FSFVQENSTH EYNWQQMPML PLQPLTYTNQ  180
SPCFNDQHSI KKLLINLGGR FSDDNYYPPL DGLLNHQFSN GIYQEQVHVV SSSSACISNN  240
NINKSEVQCA HNNYQGRGST FTSPNEEMVS TTNYPQRLDG LEFFYEEDMV NYKIIGSSRT  300
CSQSSNWAET NTRIYHHPLI ASNYQIQGLS QETQQECVLQ EFSYPVVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	7e-87	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW03415