PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW02886 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23418.2 Da PI: 7.6398 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63 | 6.3e-20 | 20 | 70 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +gr++AeIrdp + ++r++lg+f++ae+Aa+a++aa+ +l+g OIW02886 20 PRYRGVRKRP-WGRFAAEIRDPLK---KARVWLGTFDSAEDAARAYDAAAISLRG 70 68********.**********743...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MRKISAPATE ALEMIPPVEP RYRGVRKRPW GRFAAEIRDP LKKARVWLGT FDSAEDAARA 60 YDAAAISLRG PKAKTNFPIN PSPFYHHLPT DPNFHHHRYY ATNGGGGFND HVVINPNRPT 120 SSGMSSTVES FSGPRHPSAV PPPVATRRYP RTPPVVAEDC HSDCDSSSSV VDDGDNIASS 180 SFKAPLPFDL NVPPLDVDAD VAIGNGYFHC TALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 8e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW02886 |