PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW02410
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 563aa    MW: 61988.5 Da    PI: 6.5094
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW02410genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3794.9e-25116216299
               EEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
        B3   2 fkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                k+ltpsd+++ g +++p+ +a++       + +++  +tl ++d +g++W++++iyr++++r++lt+GW++Fv +++L +gD+vvF+  ++s++e +v++
  OIW02410 116 AKILTPSDANNGGGFSVPRFCADSVlppldfEANPPV-QTLNVTDVHGKVWQFRHIYRGTPRRHLLTSGWSKFVTQKNLVAGDSVVFM--KNSNGEVFVGI 213
               699***************9999999*****9444444.39************************************************..7799999**** PP

               E-S CS
        B3  97 frk 99 
               +r+
  OIW02410 214 RRA 216
               985 PP
2Auxin_resp94.12.2e-31256339183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 aa+aa+++++Fe+vY Pra++s+Fvv++e v +a+++ +  GmR+kma+etedss+ ++ +Gtv++ s  ++  W++S+Wr+L+
    OIW02410 256 AAEAAAQGMPFEIVYFPRAGWSDFVVSAEAVDEAMRSAWGHGMRVKMAMETEDSSRMTWfQGTVTSASVPNSEPWRGSPWRMLQ 339
                 789*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MSQSAPFPSH VDPKIWRTCA GAAVKIPNLH SRVYYFPQGH LEHVSPSPSP SPHYSSLHNF  60
PVVHCRLSNV QFLADPLSDQ VFAKLLLQPT PNRFPTDSRN EVAGEFGDGD NVVSYAKILT  120
PSDANNGGGF SVPRFCADSV LPPLDFEANP PVQTLNVTDV HGKVWQFRHI YRGTPRRHLL  180
TSGWSKFVTQ KNLVAGDSVV FMKNSNGEVF VGIRRALWFS GATNNMAEDE EHGEEYNGGC  240
WRRETGRVSV KAVMQAAEAA AQGMPFEIVY FPRAGWSDFV VSAEAVDEAM RSAWGHGMRV  300
KMAMETEDSS RMTWFQGTVT SASVPNSEPW RGSPWRMLQV AWDEPEVLQN AKRVSPWQVE  360
LVSPPLLHTT FPPTKKFRAA QGLGVLSDRE GDSYFPMAWF TNSSMGHLNK TLLSSETFPV  420
GMQGARHDAF SASKLFNFTN DIDNSYLRMG SSYFGNNTMP MLKTVSTELN IGSSQSENLS  480
PNSHSSLPSF GTDFAGGHNC NAAKVGSGSF LLFGKIIQPV GSYMRDADCM ENRVSKGCGV  540
GETEGIDNPP DHSFDLLELT QQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.11e-153ARF family protein