PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02058

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 287aa MW: 32218.2 Da PI: 6.6689

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02058	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv+ +++ Gg+ +W++ ++ g+ R++k+c++rw +yl OIW02058 14 KGPWTPEEDEILVNFINKNGGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62 79*****************9*******99**********97 PP
2	Myb_DNA-binding	46.9	6.3e-15	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++l ++++ lG++ W++I++ ++ gRt++++k+ w+++l OIW02058 68 RGPFTLEEEKLVIQLHGILGNR-WAAISSQLP-GRTDNEIKNLWNTHL 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MGRAPCCDKM GLKKGPWTPE EDEILVNFIN KNGGHGSWRS LPKLAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FTLEEEKLVI QLHGILGNRW AAISSQLPGR TDNEIKNLWN THLKKRLIRM 120 GLDPQTHLPM AYSCYQLGKP LASSVSTRHM AQWESARLEA EARLSRESSL FNNDPNSFVD 180 ANNKTDSDYF LRIWNSEVGE SFRSARKFDD ITSPISSGSS SNKCGSVSAI TTELASNVKD 240 DLEWRNSDSA SSNDLEDSSD TALQLLLDFP INNDMSFLEE SSFISPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-125	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW02058