PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01243

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 358aa MW: 40828.6 Da PI: 9.594

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01243	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	9.8e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl OIW01243 4 RQRWRAEEDALLCAYVKQYGPREWNLVSQRMNtpLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + OIW01243 59 KGSLTEEEQHLVIHLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MKDRQRWRAE EDALLCAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQHLV IHLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE TKVIDRTVDP 120 INDSKYEHIL ESFAEKLVNE RPSPSYVMAS SNGSFIHTDA AVTAPAMLPS WLSISNSNNT 180 APVRPPSPSV TLSLSPSVVA APPPWMQTVR GPDNGPLVMG NVTPHGSVLA AYGDNMLMSE 240 LVECSKELEE VHHALAAHKK ETAWRLSRVE LQLDSEKASR RREKMEEIEA KIKALRDEQA 300 AALDRIEMEY REQLAVLRRD AETKEQKLTE QWAAKHSRLT KFLEQVGCRS RLAEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MKDRQRWRAE EDALLCAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQHLV IHLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE TKVIDRTVDP  120
INDSKYEHIL ESFAEKLVNE RPSPSYVMAS SNGSFIHTDA AVTAPAMLPS WLSISNSNNT  180
APVRPPSPSV TLSLSPSVVA APPPWMQTVR GPDNGPLVMG NVTPHGSVLA AYGDNMLMSE  240
LVECSKELEE VHHALAAHKK ETAWRLSRVE LQLDSEKASR RREKMEEIEA KIKALRDEQA  300
AALDRIEMEY REQLAVLRRD AETKEQKLTE QWAAKHSRLT KFLEQVGCRS RLAEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-134	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW01243