PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01008

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 308aa MW: 35165.4 Da PI: 5.0437

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01008	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.8	1.2e-13	13	58	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde l++ v+++G+++W++I ++ ++Rt+k+c++rw + OIW01008 13 KGPWKAEEDEVLLNHVNKYGPRDWSSIRSKGLLHRTGKSCRLRWVN 58 79***********************888779*********87 PP
2	Myb_DNA-binding	38.2	3.2e-12	69	108	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +++ eE+ +++ ++ G++ W++Ia++++ gRt++++k++w OIW01008 69 KFSVEEERVVIELQAEIGNK-WAKIASYLQ-GRTDNDVKNFW 108 799***************.*****.********* PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MHVKNEEECY IKKGPWKAEE DEVLLNHVNK YGPRDWSSIR SKGLLHRTGK SCRLRWVNKL 60 QPNLKNGCKF SVEEERVVIE LQAEIGNKWA KIASYLQGRT DNDVKNFWSS RQKRLARILH 120 TTTCTSKSQK NKTKVSEVQD GFTLEASKLS SSMEGESSSI MSQQSYSLSF NQNSEFIKMV 180 PLPSSDINHA EQEFITPFES YKNTEQISFP QVPELKTDIT FSMESQDLLA RIDEPNFIDV 240 FDPIHASSEY EIGVELPIGL PFFEPLSGNS GIGTRDRVEN SKNSDSFFDD FPVDIFDDME 300 QPTSPSKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	1e-73	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW01008