PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW00956 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 220aa MW: 24749.2 Da PI: 8.1575 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 246.2 | 6.2e-76 | 18 | 184 | 3 | 170 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvssekl 101 s s+q+Cyv+CnfC+t+lavsvP tslfk+vtvrCGhCt+llsvn++ + + h+++++ + l+ee + + + +++++ ++++ +++ OIW00956 18 QLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPPTNQLHVGHNFFTPqnLMEEIR--NAPSTNMMMNQMPNQNDLVMNT- 115 56889****************************************9999988888888888888876622444444..3333444445555555555555. PP YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + ee+p++pp +rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl OIW00956 116 MRGGPEEIPKPPPPNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 184 4677899************************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 220 aa Download sequence |
MSASSTSFSP DQQQQQQQLS PSDQLCYVHC NFCDTVLAVS VPCTSLFKTV TVRCGHCTNL 60 LSVNMRGLLL PPTNQLHVGH NFFTPQNLME EIRNAPSTNM MMNQMPNQND LVMNTMRGGP 120 EEIPKPPPPN RPPEKRQRVP SAYNRFIKDE IQRIKAGNPD ISHREAFSAA AKNWAHFPHI 180 HFGLMPDHQP VKKANIRQEA EDVLMKDGFF SPANVGVTPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45190.1 | 9e-81 | YABBY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW00956 |