PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00211

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 1021aa MW: 114169 Da PI: 6.0767

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00211	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.1	1.3e-21	118	219	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+++lt sd++++g +++p++ ae++ +++++ ++l+ +d++ +W +++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++l+++ OIW00211 118 FCTTLTASDTSTHGGFSVPRRAAEKIfppldySMQPPA-QELVAKDLHDTTWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDERQNLLLG 215 899**************************9545444.38**********************************************..5578888999 PP EE-S CS B3 96 vfrk 99 ++r+ OIW00211 216 LRRA 219 9986 PP
2	Auxin_resp	122.7	2.7e-40	244	326	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aa+aa+++s+F+++YnPras+seFv++++k++ka++++vs+GmRf+m+fete+s rr++Gt++gvsdldpvrW+ S+Wr+L+ OIW00211 244 AANAAANNSPFTIFYNPRASASEFVIPFAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGVSDLDPVRWKSSQWRNLQ 326 799******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1021 aa Download sequence
MSISITVERK TINSELWHAC AGPLVSLPPV GSLVVYFPQG HSEQVAASMQ KQTDFIPSYP 60 DLQSKLICRL QNVALHADPE TDEVYAQMTL QTINKYDNEA ILASDMGLKQ SRQPTEFFCT 120 TLTASDTSTH GGFSVPRRAA EKIFPPLDYS MQPPAQELVA KDLHDTTWAF RHIYRGQPKR 180 HLLTTGWSVF VSTKRLFAGD SVLFIRDERQ NLLLGLRRAN RQQPALSSSV ISSDSMHIGI 240 LAAAANAAAN NSPFTIFYNP RASASEFVIP FAKYNKAMYT QVSLGMRFRM MFETEESGVR 300 RYMGTITGVS DLDPVRWKSS QWRNLQVGWD ESTAGERPSR VSLWEIEPVV SPFYICPPQF 360 LRSRFPRQPG MSDDGSDIEN AFKRVMPWLG EDFGMNDPSN SVYPGLSLVQ WMSMQQNNQF 420 SAAQPGFFPA MLSPNTMHNN LGTDNPSKLL ISSNQNTNQF VPQPVAYSQL QQQQLLSGDI 480 PPQQSIQSAS KNTFPLPTLP QDSQSQQQID QQASLLQRQQ QQTQLQQSPL QLLQQTLSQR 540 VIQQPQMTQM SLQNPSEKQV QLQFLQKWQQ QQQQQHQHLL SMSSPLLQSQ LLQQQNTHQQ 600 NQQLPQQNLS RHEPQQLGMG NNALPTKKPL NSNNFTSSSA LMQSKQLPVN QIQNTQKALT 660 ITRAPSTLTD GDAPSCSTSP STNNCQISPS SLLKRNHQVS ATFGGSLVVD PTCNLIQELY 720 SKSDMQIKHE FSSVNGPDQT KHKGTITDHL EASSSGTSYC LGPGSVQENL PLPNFFIDGD 780 IQSHPRNNLP FDSNLDVLAS DTMLLKGSDS QGDLQYLLAN YGGAPRDIKT ELSTADISSQ 840 SFGLPNVSFN PACSSDVGIN DIGVLNNSVR ASQTQRVRTY TKVQKRGSVG RCIDVTRYKG 900 YDELRYDLAR MFGIEGQLED PHRTEWKLVY VDHESDILLV GDDPWEEFVS CVQSIKIFSS 960 TEVQQMNLDG DLDKDFIRDN LEDQLNFLKL LGGASTLLYH KWKGDIFIAN DAVEEGIVED 1020 K

Sequence ? help Back to Top

Protein Sequence Length: 1021 aa Download sequence

MSISITVERK TINSELWHAC AGPLVSLPPV GSLVVYFPQG HSEQVAASMQ KQTDFIPSYP  60
DLQSKLICRL QNVALHADPE TDEVYAQMTL QTINKYDNEA ILASDMGLKQ SRQPTEFFCT  120
TLTASDTSTH GGFSVPRRAA EKIFPPLDYS MQPPAQELVA KDLHDTTWAF RHIYRGQPKR  180
HLLTTGWSVF VSTKRLFAGD SVLFIRDERQ NLLLGLRRAN RQQPALSSSV ISSDSMHIGI  240
LAAAANAAAN NSPFTIFYNP RASASEFVIP FAKYNKAMYT QVSLGMRFRM MFETEESGVR  300
RYMGTITGVS DLDPVRWKSS QWRNLQVGWD ESTAGERPSR VSLWEIEPVV SPFYICPPQF  360
LRSRFPRQPG MSDDGSDIEN AFKRVMPWLG EDFGMNDPSN SVYPGLSLVQ WMSMQQNNQF  420
SAAQPGFFPA MLSPNTMHNN LGTDNPSKLL ISSNQNTNQF VPQPVAYSQL QQQQLLSGDI  480
PPQQSIQSAS KNTFPLPTLP QDSQSQQQID QQASLLQRQQ QQTQLQQSPL QLLQQTLSQR  540
VIQQPQMTQM SLQNPSEKQV QLQFLQKWQQ QQQQQHQHLL SMSSPLLQSQ LLQQQNTHQQ  600
NQQLPQQNLS RHEPQQLGMG NNALPTKKPL NSNNFTSSSA LMQSKQLPVN QIQNTQKALT  660
ITRAPSTLTD GDAPSCSTSP STNNCQISPS SLLKRNHQVS ATFGGSLVVD PTCNLIQELY  720
SKSDMQIKHE FSSVNGPDQT KHKGTITDHL EASSSGTSYC LGPGSVQENL PLPNFFIDGD  780
IQSHPRNNLP FDSNLDVLAS DTMLLKGSDS QGDLQYLLAN YGGAPRDIKT ELSTADISSQ  840
SFGLPNVSFN PACSSDVGIN DIGVLNNSVR ASQTQRVRTY TKVQKRGSVG RCIDVTRYKG  900
YDELRYDLAR MFGIEGQLED PHRTEWKLVY VDHESDILLV GDDPWEEFVS CVQSIKIFSS  960
TEVQQMNLDG DLDKDFIRDN LEDQLNFLKL LGGASTLLYH KWKGDIFIAN DAVEEGIVED  1020
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	OIW00211