PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV99550 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 271aa MW: 30433.3 Da PI: 9.7342 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.5e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl OIV99550 14 KGAWTKEEDDRLISYIRSHGEGSWRSLPKAAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 59.7 | 6.5e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel ++++ +lG++ W++Ia++++ gRt++++k++w+++ OIV99550 67 RGNFTEEEDELVIKLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDDRLISYIR SHGEGSWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELVIK LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIRRKLMSRG 120 IDPATHRPLN DAENRVQDHE VKASVAATNT ISFASSASAA AVVVKQEQDP SITSKSSMFG 180 VVDGKGTLLE RCPDLNLELT ISPPRLNEPE QPFKNMDRSI FFGYNLGMQN SNDSSDIGNS 240 TSSGKRNSTS TGYDFLGLKT GVWDYRRLKM K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16720.1 | 1e-100 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV99550 |