PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99395

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 681aa MW: 76012 Da PI: 8.6993

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99395	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.8	4.5e-07	586	635	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ +E e l++av++lG g+W+ + k+Rt ++k++w ++ OIV99395 586 RRPFSVDEVETLIQAVEKLGIGRWRDVKILAFenaKHRTYVDLKDKWKTL 635 6799*******************998888888***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MVLQQRLDYG FNGFQVPATA RRTRSTMRRA KFQRTVDKNQ MCAFDVLATI AGKILQENWN 60 PTMTTDTSSE KGHSRFDKEC QNANKTFKAE LSDEGSCGEK CFSPLSSQTN NPNCCLKEFP 120 HPESDGHSGI ASIVTSSSFM ERVDPNNLVD GKSHKEMENI TSNAKLDSPG YAEVSCCKLD 180 GDTSRVKDEL HKFENMPIES GTKMCCFEDP LDENHPALIS LDDNAKLSRY NDGIPCSSLS 240 KGCGDVPVVS RDDDEFFFGC SHPCTKPKSF RPMASIGDRI RKTLASKYSK VAQESKVDIH 300 SSSDGYFKPT YHSKKYCYKR QRSQMNIPLK KRKLFNCSSV SNSKGFLRSG GIYYSPVNDM 360 SHNAPGSSPG RMREDCGIES LEAHQQSALR CGGSRVKLRI RSFRVPELSI EIPETATIGS 420 LKRTVMDTVT ASLGGGLHIG VSFQGKKVTD DSKTLLQTGI SLDNQLDAFG FTLEHNSSPS 480 LPRLCAANSP HVPSLEIHQS PISPAVIHRR SQGNFDMLPE LQVTNLGNFV ESDLISTPSP 540 INASLDKGRK DYKTLYTVPE MAEEELAMIP VLQKSKRSEI VQRRIRRPFS VDEVETLIQA 600 VEKLGIGRWR DVKILAFENA KHRTYVDLKD KWKTLVHTAR ISPQQRRGQP VPQELLDRVL 660 IAHAYWSQHQ TKVTAQTASR N

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MVLQQRLDYG FNGFQVPATA RRTRSTMRRA KFQRTVDKNQ MCAFDVLATI AGKILQENWN  60
PTMTTDTSSE KGHSRFDKEC QNANKTFKAE LSDEGSCGEK CFSPLSSQTN NPNCCLKEFP  120
HPESDGHSGI ASIVTSSSFM ERVDPNNLVD GKSHKEMENI TSNAKLDSPG YAEVSCCKLD  180
GDTSRVKDEL HKFENMPIES GTKMCCFEDP LDENHPALIS LDDNAKLSRY NDGIPCSSLS  240
KGCGDVPVVS RDDDEFFFGC SHPCTKPKSF RPMASIGDRI RKTLASKYSK VAQESKVDIH  300
SSSDGYFKPT YHSKKYCYKR QRSQMNIPLK KRKLFNCSSV SNSKGFLRSG GIYYSPVNDM  360
SHNAPGSSPG RMREDCGIES LEAHQQSALR CGGSRVKLRI RSFRVPELSI EIPETATIGS  420
LKRTVMDTVT ASLGGGLHIG VSFQGKKVTD DSKTLLQTGI SLDNQLDAFG FTLEHNSSPS  480
LPRLCAANSP HVPSLEIHQS PISPAVIHRR SQGNFDMLPE LQVTNLGNFV ESDLISTPSP  540
INASLDKGRK DYKTLYTVPE MAEEELAMIP VLQKSKRSEI VQRRIRRPFS VDEVETLIQA  600
VEKLGIGRWR DVKILAFENA KHRTYVDLKD KWKTLVHTAR ISPQQRRGQP VPQELLDRVL  660
IAHAYWSQHQ TKVTAQTASR N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-110	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV99395