PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV98677 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | GATA | ||||||||
Protein Properties | Length: 245aa MW: 27242.4 Da PI: 6.362 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.3 | 1.2e-19 | 175 | 209 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l OIV98677 175 CQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRL 209 *******************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MEAIGSVDEL LDFSLDVGEV DDDDDKNRKA FPKLDLKCSD PPSLSPLDLG DPSPPFSEFA 60 EEELEWLSNK DAFPEVETFV DLPSIQPNLS KHETGSMLEY STSSSNSNNS PNSISLLSGY 120 DNLNVPVRPR SKSRSRSRHL ASNSGISSQQ SWWRQPINES AKLEVITMST IGRKCQHCGA 180 EKTPQWRAGP LGPKTLCNAC GVRYKSGRLV PEYRPASSPS FRSDLHSNSH RKVMEMRKQK 240 QIGMT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 8e-43 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV98677 |