PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98668

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 530aa MW: 61098.7 Da PI: 7.7325

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98668	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.4	2.2e-10	321	363	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + +WT+eE e ++++ kq+G++ Wk+Ia+ +g +++ ++k+ w+ OIV98668 321 KRNWTEEEVEFIKNVQKQHGSD-WKSIAEALG--KSRFHVKDTWRR 363 569*****************.****8..8****99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MDEKVKKKKG SKIDESNSGS GFELELNKGK KRKHKEGKKK HGTDEIVDLS EAQEKNCTGE 60 VTERQTDSID GNRETENHIN KKKKKKKRKE CDALLDGMQE VDASKPSKKG KMTEDNEFQN 120 NEHDLPLVKD NEAEGDDQGK KKKKSSGKSK LTDKSKINEC DQDLAKSSLT EDDDQGKEMK 180 KELSGKGKRK ESNDFNEHEQ GKKRKAKKKT KASTTESPSP APGSTSKPKR VTFSDKVEVC 240 SDDIVVRGIR FTPEEDEKIK EAVFSYIKSH DLGDEGLDMV LHCRLHPEVK DCWKEIAATL 300 PHRPHGSVYN RAHVLFERDE KRNWTEEEVE FIKNVQKQHG SDWKSIAEAL GKSRFHVKDT 360 WRRIKLDTAK TGHWTQEEYQ NLFDLVNLDL RVRALEESKQ SRHGMLRDNI SWEAIAGKLE 420 TRTSQRCCKK WYEQITSPMV ADNMWSDTDD YRLINALFTL DACCFEEVEW DYLLDHRPGD 480 VCRKRWNEMV RHIGELVGKS FVDQVEILAK RFCPELLEAR EAFDSKPVIN

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MDEKVKKKKG SKIDESNSGS GFELELNKGK KRKHKEGKKK HGTDEIVDLS EAQEKNCTGE  60
VTERQTDSID GNRETENHIN KKKKKKKRKE CDALLDGMQE VDASKPSKKG KMTEDNEFQN  120
NEHDLPLVKD NEAEGDDQGK KKKKSSGKSK LTDKSKINEC DQDLAKSSLT EDDDQGKEMK  180
KELSGKGKRK ESNDFNEHEQ GKKRKAKKKT KASTTESPSP APGSTSKPKR VTFSDKVEVC  240
SDDIVVRGIR FTPEEDEKIK EAVFSYIKSH DLGDEGLDMV LHCRLHPEVK DCWKEIAATL  300
PHRPHGSVYN RAHVLFERDE KRNWTEEEVE FIKNVQKQHG SDWKSIAEAL GKSRFHVKDT  360
WRRIKLDTAK TGHWTQEEYQ NLFDLVNLDL RVRALEESKQ SRHGMLRDNI SWEAIAGKLE  420
TRTSQRCCKK WYEQITSPMV ADNMWSDTDD YRLINALFTL DACCFEEVEW DYLLDHRPGD  480
VCRKRWNEMV RHIGELVGKS FVDQVEILAK RFCPELLEAR EAFDSKPVIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	35	KKKKGSKIDESNSGSGFELELNKGKKRKHK
2	81	110	KKKKGSKIDESNSGSGFELELNKGKKRKHK
3	81	87	KKKKKKK
4	81	89	KKKKKKKRK
5	82	111	KKKKGSKIDESNSGSGFELELNKGKKRKHK
6	82	88	KKKKKKK
7	83	112	KKKKGSKIDESNSGSGFELELNKGKKRKHK
8	83	89	KKKKKKK
9	84	113	KKKKGSKIDESNSGSGFELELNKGKKRKHK
10	84	89	KKKKRK
11	85	114	KKKKGSKIDESNSGSGFELELNKGKKRKHK
12	188	205	KRKESNDFNEHEQGKKRK
13	188	208	KRKESNDFNEHEQGKKRKAKK
14	202	231	KKKKGSKIDESNSGSGFELELNKGKKRKHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-121	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV98668