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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV98125 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 301aa MW: 33512.6 Da PI: 8.8734 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 54.5 | 2.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+l++ +k +G g+W++ ++ g+ R++k+c++rw +yl
OIV98125 14 KGAWTKEEDERLINHIKIHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
79******************************99************97 PP
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| 2 | Myb_DNA-binding | 55.6 | 1.3e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++++eEde++++++ +lG++ W++Ia+++ gRt++++k++w+++
OIV98125 67 RGNFSEEEDEIIINLHSLLGNK-WSLIAARLS-GRTDNEIKNYWNTH 111
89********************.*********.************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 301 aa Download sequence |
MGRSPCCEKE HTNKGAWTKE EDERLINHIK IHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF SEEEDEIIIN LHSLLGNKWS LIAARLSGRT DNEIKNYWNT HIKRKLYSGG 120 IDPQNHQPLN ASAAATTTPT ATTVPPSNTV ATISNKKRNN DSISNIKHDT SNNNFQFVNG 180 TEDSNCSSGV TIEELAFNPH NQLNLDLSIG LSTNQPKVSS STINQENKNK KLKQEPQILY 240 QLYNGNKVNT TQQGVCLCYG LGFQSNNKAC SCKAMGSATT TVTATIATNN DMCRFYQPMS 300 F |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G38620.1 | 3e-82 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV98125 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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