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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV97997 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 333aa MW: 38232.5 Da PI: 9.7815 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 56.7 | 5.3e-18 | 19 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ede+l ++v+q+G +W++Ia++++ gR++k+c++rw++
OIV97997 19 RGHWRPVEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 64
899*****************************.***********996 PP
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| 2 | Myb_DNA-binding | 55 | 1.9e-17 | 71 | 114 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++T+eE+e+l+ ++ +G++ W++Iar ++ gRt++ +k++w+
OIV97997 71 RRPFTEEEEERLLASHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 114
679*******************.*********.***********96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 333 aa Download sequence |
MEDSSAADST GEETKICPRG HWRPVEDEKL RQLVEQYGAQ NWNSIAEKLQ GRSGKSCRLR 60 WFNQLDPRIN RRPFTEEEEE RLLASHRIHG NKWALIARLF PGRTDNAVKN HWHVIMARRQ 120 REQSKLCGKR RFQELYNDSN IEKIPKSKDL LFSSRIGFEN ARVFDFRNLN RTPSRNSLST 180 WNFASSSLHI ATSTNTSNTN LVADSFTKGG KDVYFNRSNV YLPECSKSSD RFLYRMYPNT 240 TTTTSFGTFR GSSSTNAFSF PNYKRVVQSP FGFLGSSDHD GRIKNDLRSF CDNSSTFTNL 300 KASSEKEQAD YEPNIEHKEV PFIDFLGVGV SSS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G17950.1 | 3e-68 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV97997 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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