PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97848

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 592aa MW: 63574.4 Da PI: 8.9297

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97848	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.9	8.6e-12	199	246	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqk 46 r+rW++eEd++l av+++G g+W+t a+ + +Rt+ q+ rw OIV97848 199 RKRWSEEEDDQLRAAVQRWGEGNWTTMAKGENfsVKRTGVQLSQRWKF 246 89******************************99********75 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MPSSDKKQKK IYFSEGDAAA LIQRYDARTV LTLLQEIAQY PGSKIDWNEL VRKTTTGISN 60 AREYQMLWRH LAYRDDLPEN PGDAEEPLDD NSDVEYELEA LPPISAESAS EATACVKVMI 120 ASRMPSIPNS STIEAPLTVN IPVCHSSRTR NESSEPSNLL QGSSIIFPVT VQRTPLPTVS 180 STEGIEAKGT VGGNLASKRK RWSEEEDDQL RAAVQRWGEG NWTTMAKGEN FSVKRTGVQL 240 SQRWKFLRTK QDSTNLGTNS VPSRCTAAVQ KATNDALQQA TNNALSCALG GKFAAPGATN 300 PASISFNKSV NSSVQPCNTV EAPIGRSNLV PTQNLSQKAV LGSNDAKSKS ILEKTVVKCN 360 PTLDSKVKTN TIASAARIVS SSNTVSQFKV AQTSSSLAKP TIPVALCSNP KLPNVRTDSS 420 VAPALVPSKS DAVATSHASC VSTVKPVSST LKSSPVALSK LSEPDKHVPS VVNKVVPVKQ 480 EVIATDEFKV PVPCPTSKDK VQAYETSTLT NNNNHMPVQS NINKGRQDLN QDKVINLPFN 540 KGGETSVKNA SGEISNDKAA SQNSEECEDQ GTVKVTENRQ VATDSKIRGV KV

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MPSSDKKQKK IYFSEGDAAA LIQRYDARTV LTLLQEIAQY PGSKIDWNEL VRKTTTGISN  60
AREYQMLWRH LAYRDDLPEN PGDAEEPLDD NSDVEYELEA LPPISAESAS EATACVKVMI  120
ASRMPSIPNS STIEAPLTVN IPVCHSSRTR NESSEPSNLL QGSSIIFPVT VQRTPLPTVS  180
STEGIEAKGT VGGNLASKRK RWSEEEDDQL RAAVQRWGEG NWTTMAKGEN FSVKRTGVQL  240
SQRWKFLRTK QDSTNLGTNS VPSRCTAAVQ KATNDALQQA TNNALSCALG GKFAAPGATN  300
PASISFNKSV NSSVQPCNTV EAPIGRSNLV PTQNLSQKAV LGSNDAKSKS ILEKTVVKCN  360
PTLDSKVKTN TIASAARIVS SSNTVSQFKV AQTSSSLAKP TIPVALCSNP KLPNVRTDSS  420
VAPALVPSKS DAVATSHASC VSTVKPVSST LKSSPVALSK LSEPDKHVPS VVNKVVPVKQ  480
EVIATDEFKV PVPCPTSKDK VQAYETSTLT NNNNHMPVQS NINKGRQDLN QDKVINLPFN  540
KGGETSVKNA SGEISNDKAA SQNSEECEDQ GTVKVTENRQ VATDSKIRGV KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58220.1	8e-71	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV97848