PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97607

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SRS

Protein Properties

Length: 280aa MW: 31031.4 Da PI: 7.7872

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97607	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	104.1	2.3e-32	97	157	3	63
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasska 63 s +++CqdCGn+akk+C+h+RCRtCCksrgf+C+thvkstWvpaakrrerqq+++++ +++ OIV97607 97 SSGMNCQDCGNHAKKECVHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQHNTSKRHRH 157 5689***********************************************9999876654 PP
2	DUF702	78	2.6e-24	163	215	101	153
DUF702 101 etsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++P+ev+s+ vfrcv+v++vd ee++aYq+a++igGh+fkGiLydqG+e OIV97607 163 VGVQFPHEVNSTTVFRCVKVTAVDTPEEQYAYQAAINIGGHIFKGILYDQGPE 215 2346***********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MAGLFSLGQE NKEGEEDNNR NSLLLFRNEE IYNKGFEIWP QSYHQNQSLN NYYSSYGVGP 60 SRRNSIPSSN VGYDDVSLSD ESTRFGLTVM RTSGSSSSGM NCQDCGNHAK KECVHMRCRT 120 CCKSRGFQCQ THVKSTWVPA AKRRERQQHN TSKRHRHHQG LEVGVQFPHE VNSTTVFRCV 180 KVTAVDTPEE QYAYQAAINI GGHIFKGILY DQGPEGSYTN IEGSSGGVGV GVEAQQQIGL 240 LTSPTTVTTT GNLFDPSSLY PPPLMNAFMA GTQFFPPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	4e-66	SRS family protein

Link Out ? help Back to Top
Ensembl	OIV97607