PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV97481 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | NF-YC | ||||||||
Protein Properties | Length: 171aa MW: 19187.3 Da PI: 4.4322 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 47.9 | 3e-15 | 5 | 96 | 11 | 101 |
NF-YC 11 ekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivprdel 101 +++++ + e+P rik+i++ d++v+++s ea l++++ elf+ l+ +s a e+kr+ +k ++ av+r + + dfl+d pr + OIV97481 5 DENANSTRPEFPTGRIKRIMRLDNEVNRVSGEALLLVTRSTELFLQFLADKSARVAIEKKRKIVKLEHLTLAVKRHQpTSDFLLDSLPRADE 96 4566777889***************************************************************9976489********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MAEEDENANS TRPEFPTGRI KRIMRLDNEV NRVSGEALLL VTRSTELFLQ FLADKSARVA 60 IEKKRKIVKL EHLTLAVKRH QPTSDFLLDS LPRADEKIAP PSNRSSKADN PPPRSNRRID 120 QFFKKQVTEP DDDADAQAEA EAEAETEPEA EAEPEAEAEL EAEAPVPIDE C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 6e-44 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV97481 |