PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97342

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 1000aa MW: 111568 Da PI: 6.1377

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97342	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.3	1.2e-22	118	219	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++l++ OIV97342 118 FCKTLTASDTSTHGGFSVPRRAAEKMfppldfsM-QPPA-QEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEKQQLLL 214 99***************************954.4444.48**********************************************..557888899 PP EEE-S CS B3 95 kvfrk 99 ++ r+ OIV97342 215 GIKRA 219 88775 PP
2	Auxin_resp	125.1	4.6e-41	244	326	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s+F+++YnPras+seFv++ +k++kal+++vs+GmRf+m+feteds rr++Gt++g+sdldpvrW+nS+Wr+L+ OIV97342 244 AAHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALYTQVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPVRWKNSQWRNLQ 326 79*******************************************************************************97 PP
3	Auxin_resp	32.1	5.1e-12	491	520	54	83
Auxin_resp 54 sserrlsGtvvgvsdldpvrWpnSkWrsLk 83 s rr++Gt++g+sdldpvrW+nS+Wr+L+ OIV97342 491 SGVRRYMGTITGISDLDPVRWKNSQWRNLQ 520 56799***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1000 aa Download sequence
MSVPITGERK RINSELWHAC AGPLVSLPPV GSLVVYFPQG HSEQVAASMQ KEADFVPSYP 60 NLPSKLICML HNVALHADLE TDEVYAQMTL QPVNKYDKEA MLASDMGLKQ NQQPTEFFCK 120 TLTASDTSTH GGFSVPRRAA EKMFPPLDFS MQPPAQEIVA KDLHDNTWTF RHIYRGQPKR 180 HLLTTGWSVF VSTKRLFAGD SVLFIRDEKQ QLLLGIKRAN RQQPALSSSV ISSDSMHIGI 240 LAAAAHAASN NSPFTIFYNP RASPSEFVIP SAKYNKALYT QVSLGMRFRM MFETEDSGVR 300 RYMGTITGIS DLDPVRWKNS QWRNLQVGWD ESTAGERPSR VSIWDIEPVV TPFYICPPPF 360 FRPKFPKQPG MPEDESDIEN AFKRAMPWLG DDLGVKDASS SLFPGLSLVQ WMSMQQNNQF 420 NPAQSGYFPQ SMISSNTLHG NLNTDDPSKL LNFQAPPSLQ FNKPNLSNLV NQLQQSPTSW 480 PQQQQQQKMQ SGVRRYMGTI TGISDLDPVR WKNSQWRNLQ VGWDESTAGE RPSRVSIWDI 540 EPVVTPFYIC PPPFFRPKFP KQPGMPEDES DIENAFKRAM PWLGDDLGVK DASSSLFPGL 600 SLVQWMSMQQ NNQFNPAQSG YFPQSMISSN TLHALMQSQQ LPVNQSMNTQ KSLTNVRGPS 660 SLTDAEAPSC STSPSTNNCQ ISPPNLLKRN HQVPSTLGGA SVVEPTSNLI QELHCKPDIQ 720 IKHELSGMKG PDQLKYKGTI GDQLEASSSG TSYCIDPANI HQNFQLPNFC MDGDVQSHPR 780 SNIPFASNLD GLTPDTFLSR GYDSQKDLHN LLNHYGSAPR DIQTELSTAD ISPESFGVPN 840 MPFKPGCSND MAINDTGILN NGPWANQTQR MRTYTKVQKV GSVGRCIDVT RYKGYDELRH 900 DLARMFGIEG QLEDPQRTEW KLVYVDHEND ILLVGDDPWE EFVSCVLSIK ILSSAEVQQM 960 SLDGDLGGHV PISNQTCSGT ESGIAWRGQY DDNSAGSFNR

Sequence ? help Back to Top

Protein Sequence Length: 1000 aa Download sequence

MSVPITGERK RINSELWHAC AGPLVSLPPV GSLVVYFPQG HSEQVAASMQ KEADFVPSYP  60
NLPSKLICML HNVALHADLE TDEVYAQMTL QPVNKYDKEA MLASDMGLKQ NQQPTEFFCK  120
TLTASDTSTH GGFSVPRRAA EKMFPPLDFS MQPPAQEIVA KDLHDNTWTF RHIYRGQPKR  180
HLLTTGWSVF VSTKRLFAGD SVLFIRDEKQ QLLLGIKRAN RQQPALSSSV ISSDSMHIGI  240
LAAAAHAASN NSPFTIFYNP RASPSEFVIP SAKYNKALYT QVSLGMRFRM MFETEDSGVR  300
RYMGTITGIS DLDPVRWKNS QWRNLQVGWD ESTAGERPSR VSIWDIEPVV TPFYICPPPF  360
FRPKFPKQPG MPEDESDIEN AFKRAMPWLG DDLGVKDASS SLFPGLSLVQ WMSMQQNNQF  420
NPAQSGYFPQ SMISSNTLHG NLNTDDPSKL LNFQAPPSLQ FNKPNLSNLV NQLQQSPTSW  480
PQQQQQQKMQ SGVRRYMGTI TGISDLDPVR WKNSQWRNLQ VGWDESTAGE RPSRVSIWDI  540
EPVVTPFYIC PPPFFRPKFP KQPGMPEDES DIENAFKRAM PWLGDDLGVK DASSSLFPGL  600
SLVQWMSMQQ NNQFNPAQSG YFPQSMISSN TLHALMQSQQ LPVNQSMNTQ KSLTNVRGPS  660
SLTDAEAPSC STSPSTNNCQ ISPPNLLKRN HQVPSTLGGA SVVEPTSNLI QELHCKPDIQ  720
IKHELSGMKG PDQLKYKGTI GDQLEASSSG TSYCIDPANI HQNFQLPNFC MDGDVQSHPR  780
SNIPFASNLD GLTPDTFLSR GYDSQKDLHN LLNHYGSAPR DIQTELSTAD ISPESFGVPN  840
MPFKPGCSND MAINDTGILN NGPWANQTQR MRTYTKVQKV GSVGRCIDVT RYKGYDELRH  900
DLARMFGIEG QLEDPQRTEW KLVYVDHEND ILLVGDDPWE EFVSCVLSIK ILSSAEVQQM  960
SLDGDLGGHV PISNQTCSGT ESGIAWRGQY DDNSAGSFNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	OIV97342