PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97100

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 382aa MW: 42437.2 Da PI: 6.1878

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97100	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+ +++ +G+g+W+t +++ g+ R++k+c++rw++yl OIV97100 14 KGAWTVEEDQKLITYIQTHGTGSWRTMPQKAGLQRCGKSCRLRWFNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.1	6.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++eE++ ++++++ lG++ W++Ia++++ Rt++++k++w++yl OIV97100 67 RGHLSEEEEQTIIRLHAALGNR-WSSIAKHLP-MRTDNEIKNYWNSYL 112 66779***************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MGRTPCCNHE EMKKGAWTVE EDQKLITYIQ THGTGSWRTM PQKAGLQRCG KSCRLRWFNY 60 LRPDIKRGHL SEEEEQTIIR LHAALGNRWS SIAKHLPMRT DNEIKNYWNS YLKKQLDIKG 120 VDPFSTKPIT TVSSSSDSEP NTNEGSSKSE SSQLLNKVAK KIVGSGYLDA VKSLQLVADN 180 TINDDFVTKI EFESRRDNTI KQSHVPNFSS ISSHSSTSAQ LLNKMATSLS KKTHGHEAAK 240 AIFSKIMEGD EKSEASADGS ANNNALNLFE DEPKITRIID SPSSPTVTFN EVLSHSCFLD 300 NWQCFSSNYI SFGNCAASGD DSSVSGVNLR SSSSFCIESP NYSTLCFLDE NAPAASAADK 360 SDDYLNEILT CEDEISKYIQ YL

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MGRTPCCNHE EMKKGAWTVE EDQKLITYIQ THGTGSWRTM PQKAGLQRCG KSCRLRWFNY  60
LRPDIKRGHL SEEEEQTIIR LHAALGNRWS SIAKHLPMRT DNEIKNYWNS YLKKQLDIKG  120
VDPFSTKPIT TVSSSSDSEP NTNEGSSKSE SSQLLNKVAK KIVGSGYLDA VKSLQLVADN  180
TINDDFVTKI EFESRRDNTI KQSHVPNFSS ISSHSSTSAQ LLNKMATSLS KKTHGHEAAK  240
AIFSKIMEGD EKSEASADGS ANNNALNLFE DEPKITRIID SPSSPTVTFN EVLSHSCFLD  300
NWQCFSSNYI SFGNCAASGD DSSVSGVNLR SSSSFCIESP NYSTLCFLDE NAPAASAADK  360
SDDYLNEILT CEDEISKYIQ YL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60890.1	2e-68	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV97100