PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV96603

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 594aa MW: 64270.5 Da PI: 9.0655

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96603	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.6	9.1e-11	199	247	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 r+rWT+eEd +l av+++G g+W+t a++ +Rt+ q+ rw + OIV96603 199 RKRWTEEEDNQLRAAVQRWGEGNWETMAKRDSftVKRTPPQLSQRWTHL 247 89************************99999999*******9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MPKPNKNPKK LFFSEEDAAT LIQRNDATTV LTLLQEIAHS PNSKIDWNEL VKKTSTGISN 60 AREYQMLWRH LAYRDALPEN AAAPAEPLDD DSDLECELEA LPPTSADSVS EATACAKVMI 120 ASRMPTIPSS STIEAPLTVK VPVSHSSRTH NESSEPSNLM QGMNIIFPVT VQRTPLPTVS 180 STEGIETRGL GGGNMASKRK RWTEEEDNQL RAAVQRWGEG NWETMAKRDS FTVKRTPPQL 240 SQRWTHLRKK DGCTTTNPGT NSVQNRRSTA EQLAMNNAVS CALDPPSNTL FKKLNAPGMT 300 NPASYNKSIK SPAQPTGTAE VPIVLNNLAP TQNPSQKVVL GSCDYPAKSK SILEETRVKC 360 NPTPDSTIKA NTVASGTQIV SSLNNVSQFK VAQTTTSSLA KSTIPVALHS NSKLPNVRTD 420 SSVSPALFPS KSAAFVTSPA SCSSTIKYVS STLKNSPVAL SRLSEQDKHL TSVVNKVPLP 480 LKQEAIVTEL KVPVASPTTI VKVQADETCT ITTNNHHMLV HSNLNKGRQD MIQDKSINLP 540 FNKGGETSMK SISGEISKDK AVSQNSGECQ DQGTVKTENH QIATDSNLDR GVKV

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MPKPNKNPKK LFFSEEDAAT LIQRNDATTV LTLLQEIAHS PNSKIDWNEL VKKTSTGISN  60
AREYQMLWRH LAYRDALPEN AAAPAEPLDD DSDLECELEA LPPTSADSVS EATACAKVMI  120
ASRMPTIPSS STIEAPLTVK VPVSHSSRTH NESSEPSNLM QGMNIIFPVT VQRTPLPTVS  180
STEGIETRGL GGGNMASKRK RWTEEEDNQL RAAVQRWGEG NWETMAKRDS FTVKRTPPQL  240
SQRWTHLRKK DGCTTTNPGT NSVQNRRSTA EQLAMNNAVS CALDPPSNTL FKKLNAPGMT  300
NPASYNKSIK SPAQPTGTAE VPIVLNNLAP TQNPSQKVVL GSCDYPAKSK SILEETRVKC  360
NPTPDSTIKA NTVASGTQIV SSLNNVSQFK VAQTTTSSLA KSTIPVALHS NSKLPNVRTD  420
SSVSPALFPS KSAAFVTSPA SCSSTIKYVS STLKNSPVAL SRLSEQDKHL TSVVNKVPLP  480
LKQEAIVTEL KVPVASPTTI VKVQADETCT ITTNNHHMLV HSNLNKGRQD MIQDKSINLP  540
FNKGGETSMK SISGEISKDK AVSQNSGECQ DQGTVKTENH QIATDSNLDR GVKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	6e-56	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV96603