PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94739

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 303aa MW: 33152.6 Da PI: 8.6657

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94739	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.5	3.6e-19	5	50	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+++G+++W++I++ ++ gR++k+c++rw + OIV94739 5 KGPWSPEEDDSLQKLVEKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 50 79****************************.*********985 PP
2	Myb_DNA-binding	55.7	1.1e-17	59	101	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++++G++ W+tIar + gRt++ +k++w++ OIV94739 59 AFTPEEDETIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 101 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MDRIKGPWSP EEDDSLQKLV EKHGPRNWSL ISKSIPGRSG KSCRLRWCNQ LSPQVEHRAF 60 TPEEDETIIR AHARFGNKWA TIARLLSGRT DNAIKNHWNS TLKRKCTSFI IDEPDLNPHP 120 LKRSVSAGAA IPVSTVLFMN PSTPSSPSGS DVSESSVPVA SSSHVYRPVP RTGGVVMETT 180 SSSNDPPTSL SLSLPGVDSS SEVSNRATEP ARAVTLPAQL NVLPMLTPRM AAPVTTVAPV 240 AVQEENHDVM SVAAFNFSGE LLTVMQEMIR KEVRSFMEEK NGMCENGFRN ALVKRIGISR 300 IDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-85	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV94739