PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93365

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 566aa MW: 61847.3 Da PI: 5.9379

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93365	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.7	2.3e-12	90	134	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++lG+g+W+ I+r Rt+ q+ s+ qky OIV93365 90 PWTEEEHRRFLLGLQKLGKGDWRGISRNYVISRTPTQVASHAQKY 134 8***************************89**********9 PP
2	Myb_DNA-binding	38.7	2.3e-12	323	367	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++lG+g+W+ I+r Rt+ q+ s+ qky OIV93365 323 PWTEEEHRRFLLGLQKLGKGDWRGISRNYVISRTPTQVASHAQKY 367 8***************************89**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MTRKCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSHYAGS NSPGVETTDH 60 GAAAVADGYA SEDFLPGSSS TSRERKKGVP WTEEEHRRFL LGLQKLGKGD WRGISRNYVI 120 SRTPTQVASH AQKYFVRQSN VSRRKRRSSL FDIVADEAAE APIVEHDFLS TNQFEAETEG 180 NDPLLGPPTL DEECESMVST NSNDGEPAGP EPSNPDDNSQ SSYPVMYPAY YPPFFPFPLP 240 YWSGYSPAEP VKKEETHEVL KPTAVHSKSP LNVDELVGMS KLSLGETIGN SGPSTLKQKL 300 QEEGPSRQSA FHATSAATAC GVPWTEEEHR RFLLGLQKLG KGDWRGISRN YVISRTPTQV 360 ASHAQKYFVR QSNVSRRKRR SSLFDIVADE AAEAPIVEHD FLSTNQFEAE TEGNDPLLGP 420 PTLDEECESM VSTNSNDGEP AGPEPSNPDD NSQSSYPVMY PAYYPPFFPF PLPYWSGYSP 480 AEPVKKEETH EVLKPTAVHS KSPLNVDELV GMSKLSLGET IGNSGPSTLK QKLQEEGPSR 540 QSAFHATSAA TACGSSNING SVIHAV

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MTRKCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSHYAGS NSPGVETTDH  60
GAAAVADGYA SEDFLPGSSS TSRERKKGVP WTEEEHRRFL LGLQKLGKGD WRGISRNYVI  120
SRTPTQVASH AQKYFVRQSN VSRRKRRSSL FDIVADEAAE APIVEHDFLS TNQFEAETEG  180
NDPLLGPPTL DEECESMVST NSNDGEPAGP EPSNPDDNSQ SSYPVMYPAY YPPFFPFPLP  240
YWSGYSPAEP VKKEETHEVL KPTAVHSKSP LNVDELVGMS KLSLGETIGN SGPSTLKQKL  300
QEEGPSRQSA FHATSAATAC GVPWTEEEHR RFLLGLQKLG KGDWRGISRN YVISRTPTQV  360
ASHAQKYFVR QSNVSRRKRR SSLFDIVADE AAEAPIVEHD FLSTNQFEAE TEGNDPLLGP  420
PTLDEECESM VSTNSNDGEP AGPEPSNPDD NSQSSYPVMY PAYYPPFFPF PLPYWSGYSP  480
AEPVKKEETH EVLKPTAVHS KSPLNVDELV GMSKLSLGET IGNSGPSTLK QKLQEEGPSR  540
QSAFHATSAA TACGSSNING SVIHAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47390.1	1e-111	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV93365