PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV92372
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 146aa    MW: 16407.6 Da    PI: 5.0369
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV92372genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF21.72.6e-072252649
              HHHHHHT-EEEEEEE-TTSEEEEE CS
    SRF-TF 26 ELSvLCdaevaviifsstgklyey 49
              ELS+LC++ev v++fs  gk y +
  OIV92372  2 ELSILCGVEVVVLLFSVGGKAYSF 25
              9*******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MELSILCGVE VVVLLFSVGG KAYSFGHPSI EAVTKKFLHQ GEGSHVSHGE SSNDDDNIGK  60
LSQQLQELKD QIQVEKDKKK DLDKALSKYK FIRGKLPINN LSFEELVEFK ASWVMVQDNM  120
SESNNEMEAA SSLLLLRENR MYETGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54760.11e-10M-type_MADS family protein