PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92027

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 325aa MW: 36789.6 Da PI: 7.5467

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92027	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.5e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l +++q+G+++W++I++ g+ R++k+c++rw +yl OIV92027 14 RGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61 89********************************************97 PP
2	Myb_DNA-binding	43.7	6.2e-14	72	110	6	46
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 E++ +v+++ +G++ W++Ia+ ++ gRt++++k++w++ OIV92027 72 DSEEQTIVKLHSVFGNR-WSLIAAQLP-GRTDNDVKNHWNT 110 67*************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MGRIPCCEKE NVKRGQWTPE EDNKLSSYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY 60 LRPDLKHGQF LDSEEQTIVK LHSVFGNRWS LIAAQLPGRT DNDVKNHWNT KVKKKLSGMG 120 IDPVTHKSFS HLMAEIATTL APPQAAHLAE AALGCFKDEV LHLLTKKPIN FLGQHSAAPL 180 GNDINNYINY KQEEMDRTSD KIKLGFSKDT HDKPEMILSN KAWNSTAATS ASFAMQYSVF 240 PTMPVFQYSP SSLCNKEDDA SQWSQSVCTR STFTPMDHQN QLYEKLKENG DDSEATKEMT 300 NLSNIFNPDC VLWDLPADDL NNPMV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56110.1	1e-103	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV92027