PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV91717

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 725aa MW: 79386.9 Da PI: 7.2716

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV91717	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.1	9.3e-25	150	251	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + +++el+++ OIV91717 150 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLTSGDAVLFL--RGEDGELRLG 247 99**************************963.3445679********************************************..449999** PP EE-S CS B3 96 vfrk 99 ++r+ OIV91717 248 IRRA 251 *996 PP
2	Auxin_resp	121.2	7.9e-40	275	356	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+st+++F+v+YnPr+s+seF+++++k++k+l++++svGmRf+m+feted++err++G+++g+sd+dpvrWp+SkWr+L OIV91717 275 VVNALSTRCAFRVCYNPRVSSSEFIIPLHKFSKSLDCSYSVGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWRCL 356 6899*****************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MGLIDLNTTE DDETLSSSSF SSHSGISTCG SALPPSVPSS VCLELWHACA GPMISLPKKG 60 SVVVYFPQGH FEKQVQDFPI TACNISPHVF CRVLDVKLHA EEGSDEVYCQ LLLIPESEQM 120 EQNLREGVIN VDGEEEDAEA IVKSTTPHMF CKTLTASDTS THGGFSVPRR AAEDCFPPLD 180 YSQQRPSQEL VAKDLHGLEW RFRHIYRGQP RRHLLTTGWS AFVNKKKLTS GDAVLFLRGE 240 DGELRLGIRR AAQLKSGTFA VPSSQQLNPS TLMDVVNALS TRCAFRVCYN PRVSSSEFII 300 PLHKFSKSLD CSYSVGMRFR MRFETEDAAE RRFTGLIAGI SDVDPVRWPG SKWRCLLVRW 360 DDMETARHNR VSPWEIEPSG SASTTNNLMA ASLKRSRIGL SSEKLEFPVP NGIGASDFGE 420 SSRFRKVLQG QEMSGVNTPF DGINAQSSRL SELGRCYPGS NCSGFAATGN NLRIPQVSSD 480 FSCNGIGFGG SYGFQKVLQG QEILPSQPYG RALSMDEARG NGRFGLFDGY HHMLSSRNGW 540 SAQMHDNSSH LHASVQPGQV SSPSSVLMFQ QAVNPVLNAD YNNKHNQAGN VHYRGLYATK 600 VKGGVSATSP SVEPIYSGHA QEATNSFGMF NLRSQLGGSR SYESVSALRN SQEMASSRKS 660 SCRLFGFSLT EDRNLANKEA DPSSVTCQLN SGPPFARSIE DEFHPGRSLG NKAVGSNCTN 720 GVLQY

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MGLIDLNTTE DDETLSSSSF SSHSGISTCG SALPPSVPSS VCLELWHACA GPMISLPKKG  60
SVVVYFPQGH FEKQVQDFPI TACNISPHVF CRVLDVKLHA EEGSDEVYCQ LLLIPESEQM  120
EQNLREGVIN VDGEEEDAEA IVKSTTPHMF CKTLTASDTS THGGFSVPRR AAEDCFPPLD  180
YSQQRPSQEL VAKDLHGLEW RFRHIYRGQP RRHLLTTGWS AFVNKKKLTS GDAVLFLRGE  240
DGELRLGIRR AAQLKSGTFA VPSSQQLNPS TLMDVVNALS TRCAFRVCYN PRVSSSEFII  300
PLHKFSKSLD CSYSVGMRFR MRFETEDAAE RRFTGLIAGI SDVDPVRWPG SKWRCLLVRW  360
DDMETARHNR VSPWEIEPSG SASTTNNLMA ASLKRSRIGL SSEKLEFPVP NGIGASDFGE  420
SSRFRKVLQG QEMSGVNTPF DGINAQSSRL SELGRCYPGS NCSGFAATGN NLRIPQVSSD  480
FSCNGIGFGG SYGFQKVLQG QEILPSQPYG RALSMDEARG NGRFGLFDGY HHMLSSRNGW  540
SAQMHDNSSH LHASVQPGQV SSPSSVLMFQ QAVNPVLNAD YNNKHNQAGN VHYRGLYATK  600
VKGGVSATSP SVEPIYSGHA QEATNSFGMF NLRSQLGGSR SYESVSALRN SQEMASSRKS  660
SCRLFGFSLT EDRNLANKEA DPSSVTCQLN SGPPFARSIE DEFHPGRSLG NKAVGSNCTN  720
GVLQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	OIV91717