PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90997

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 436aa MW: 49669.9 Da PI: 4.4375

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90997	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEd++l +++k+ G g+W++ ++ g+ R++k+c++rw +yl OIV90997 14 KGRWTEEEDDILRKYIKENGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.1	6.4e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE++++v++++ +G++ W++Ia ++ gRt++++k++w+++l OIV90997 67 RGNISAEEEDIIVKLHASFGNR-WSLIATHLS-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MGRAPCCEKV GLKKGRWTEE EDDILRKYIK ENGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRGNLKRGNI SAEEEDIIVK LHASFGNRWS LIATHLSGRT DNEIKNYWNS HLSRKIYSFR 120 RPTITTDMDP TPNVVIPPRR RGGRTSRWAM KKNKISTQQI PKHIVLQQNT NETTHPKQNN 180 NNNHNNNDEV ALEVLLPPTP SLEREGNFMV LDPDVEDTVE IAAELGDELS SYYDGKGSDS 240 NCSSLLNYVV GDMDLSFHVE EVKTTHDILV DGEKQLSDDL LEGLHYQQVE DCINDVGGSL 300 SYGDKDIMDN CVVEACGISS EDNGVIKVTM NDGYSDVQDV CPNKMSSIED QNRNGVNLTT 360 TTLNDENGEW LYDNLDWENI MAFTNHDDKY NESDAKESKE DLLNWLWKDD EWESECNNLG 420 EIDLQEQNDM VAWLLS

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MGRAPCCEKV GLKKGRWTEE EDDILRKYIK ENGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRGNLKRGNI SAEEEDIIVK LHASFGNRWS LIATHLSGRT DNEIKNYWNS HLSRKIYSFR  120
RPTITTDMDP TPNVVIPPRR RGGRTSRWAM KKNKISTQQI PKHIVLQQNT NETTHPKQNN  180
NNNHNNNDEV ALEVLLPPTP SLEREGNFMV LDPDVEDTVE IAAELGDELS SYYDGKGSDS  240
NCSSLLNYVV GDMDLSFHVE EVKTTHDILV DGEKQLSDDL LEGLHYQQVE DCINDVGGSL  300
SYGDKDIMDN CVVEACGISS EDNGVIKVTM NDGYSDVQDV CPNKMSSIED QNRNGVNLTT  360
TTLNDENGEW LYDNLDWENI MAFTNHDDKY NESDAKESKE DLLNWLWKDD EWESECNNLG  420
EIDLQEQNDM VAWLLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	2e-73	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV90997